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berkeley_reactor_200306_planktonic_scaffold_158606_157

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 204233..204955

Top 3 Functional Annotations

Value Algorithm Source
4-carboxymuconolactone decarboxylase (EC:4.1.1.44) similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 237.0
  • Bit_score: 307
  • Evalue 2.50e-81
4-carboxymuconolactone decarboxylase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A9X3_COLFT similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 237.0
  • Bit_score: 307
  • Evalue 8.90e-81
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:KEA04399.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 238.0
  • Bit_score: 314
  • Evalue 1.00e-82

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGTCTGCACCGAATCCTGCCCAAACCGGACTTACCTTTGAACAAATTCGCGCGGTGTCGCCAGCACTGGAGCGATATACGCTGGACACAATCGTGGGCAACCTTTGGAAACGCCCGGAACTTTCGCCTCGCGACCGCAGTATCGTCACGGTCTCGGCGCTCATTGCGCGAAATCAAACCATCGGGATGCCGCATTACTTCAACGTCGCGCTCGAAAGTGGGGTGAAGTCCGGTGAACTCTCCGAGATCATCACGCACCTGGCATTTTACGCCGGTTGGTCAAATGGCTTTTTCGCCATTGCGATTTTGAAAGACATTTTTGCCCAGCGCGGAATCGGCGCGGATCAACTGCCGCCAGTTTTACCCGAACTGCTGCCGATAAATCAGCAGGCGGAAGATCAGCGCGCCGCAGCCGTGCATTCCAGCACTGGCGGACTTTTTCCCGGCCTGGAAAAATTCACCACGGAGTTGCTGTTCAAAAATCTGTGGCTGCGTCCCGGACTCGCCCCGCGCGATCGCAGTCTGGCCACGGTCAGTGCTTTGATTGCCAACGGGCAATCGGCGCAAATCACCTTTCATCTCAACAAGGCCATGGACAACAGCCTGACCCGGACGCAAGCTTCGGAAATTGTGGCGCAGCTTGCGTTTTACGCCGGCTGGCCCAATGCATTCTCCGCCGTGCCGGTTGTGAAGGCGGTTTTCGAGAGCCGGGGTGAAAAATAA
PROTEIN sequence
Length: 241
MSAPNPAQTGLTFEQIRAVSPALERYTLDTIVGNLWKRPELSPRDRSIVTVSALIARNQTIGMPHYFNVALESGVKSGELSEIITHLAFYAGWSNGFFAIAILKDIFAQRGIGADQLPPVLPELLPINQQAEDQRAAAVHSSTGGLFPGLEKFTTELLFKNLWLRPGLAPRDRSLATVSALIANGQSAQITFHLNKAMDNSLTRTQASEIVAQLAFYAGWPNAFSAVPVVKAVFESRGEK*