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berkeley_reactor_200306_planktonic_scaffold_158606_162

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(212384..216127)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Cellulose 1,4-beta-cellobiosidase n=1 Tax=Dickeya sp. D s0432-1 RepID=U6ZL20_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 879.0
  • Bit_score: 763
  • Evalue 3.10e-217
Cellulose 1,4-beta-cellobiosidase {ECO:0000313|EMBL:ERO59155.1}; TaxID=1231725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya solani D s0432-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 879.0
  • Bit_score: 763
  • Evalue 4.30e-217
cellulose 1,4-beta-cellobiosidase similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 830.0
  • Bit_score: 751
  • Evalue 2.00e-214

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Taxonomy

Dickeya solani → Dickeya → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3744
ATGCCGTTACTGGAAAAAATCATGACTTGTCTCAATAATTTTTTCGCGAGATGGCTGTTTGTTCTGTTGGCGGGCGGAGTGATGTCCGCTGCCGCACAGACCTATTTGGACACCATTATTTTTGGCAACACCGCCTCCGAAACCAGCCACGCGTTTGCGGGGGCAAACAGCTTTGTCATCACGAACACTTCCGTTTCGCCCGCACAAACGGCGCGGCGGGGCTCCACCAACAATCCGGCCACGGTCAACGGCGGCAGCCTGACGTTTACGCTCGCGGTGGATCCGGTCTGGCGGAGTTATTTCACGGTGAAACTGTGGGGCGGCGACGATGTCAGCCCCTCGTCCGGACAGGATAACGACATGGGCCGGCTCTATCTTTACGTTGCGGCATCCAATTTTGTCGCCGGCGCCAGCACGAATTACCAGATCGGCTACCGGCACGAGGGCGATTACATCTGCCTCAACGCCGCCGCCTACAAACCGCCGTTGCCGGGAAGATTCTTTTATTCCACAACCATCCTGCCGCTGTGGATGACGCAGGGCCGGACCAACTTGACGCTGACGATTCAACCGTGCGGGCGAATCTACGACCTGGGTTCCGGCGGTCCGCCCAGCGGCAATTACCAGTTCAACATGATCACCAACAGCCGGGCGATCTACCAGGCTTACACGCACACCGAACCGGCCTTGTGTCCCAACGGCGAAGTGCAAGGCGTGGCGCCGGCGACCATCACGCGGACGGCGACCGGTTCCGCCAGCGTGAGCACCTTGAGCCCGGGCGGCAGTTTCTACAACGGCGTCAGCAATTATTTGAGCGGCCGGATGAGCACCAGCATCAAGAATTTCAAAGTGAATGACTTCCTGCAGCTCGGCAAAGCGTATTTCCTTTCCAATTTCCCGGTGACCTACACAAACCCGGCGCTGGTGACGAAATTCATTGCGGCAGTGGATTATTACGCGTCGAACTATTACGCGAATCCGAGCGTGGTGAACGGCTGGGGCGGCAATTACGGCCCCATCGGCTGGGGCATCCACTTGCTTGCACCGGAATTGCAATCAAGTCTGGACGTGACGAACAATTACGGCACGGGCGGTAACGTTTCGCGTCGCCAAGCCTGGGGCGACATGCTGCTCGCAAGCCGCGACTACGGACGGTTCCACCGCAATACGTTGAGCAACCAGGGCCTCATTTCTGGCTCCTACATCTACATGGCCAACCGCGCGCTGCTCGATTTGACCAATGCCAGCGCCTTTGCCGAGACGAACGCCCAGCGTTACCTGCTCGAAGCCATCGGCCTGGCGCCGTGGCTGGGTGATGATTTGCCGGGCGGCGGTTCGGATTATTTGCACGGAACCAATTATTTTCAGGTGACGCCGAAAGGGTTGACGCGCGAGTGGGGCTACGTCGGCGCGTCGTATGGCGAAATGCAGTTTTACGCGGCGGACTTTTATGCGTGGACGACCAACCCCGTTTTTCTCGCGCAAGCGGTAAAGATGACGAAAGCCCGCGCGAATTTCCGCCGGCCCGCGATGGAGGTCAGCGGCGGCAGTTACTATCGCTGCATGGAAGGAATCGGCCTGCTCTCCTGGCGCGGCGCGGTTGAATCCGACAGTGAATTTGCCGATGAAATTTGTTACGGCGACCGTTCCGGATGGGATTTGGGAATGCACTGCGCGGCGGTGACGGGCGATACCAACCTGATCGGCTACGCCAAGCAGATGCTCGCCGACAATCAATATTTCAATTCCCTCAGCGGCGGCGGCAGCATCGGCAATCAAGGCGATTCGCGGGACGCTTTGGACGTTTTCAACGATTACAAAATTGTCTCCGCCGCGCCGGACAGCGGCGTGCGGCTGCCGATGACCGACGGTCAGCCGGATTTCGCGTGGGCGGACGAGGAAGATGGAATCGTCGCCATCAAACATGGCAACGAACGGCTGTGGCTCGAAACCTATTGGCAGGCTAAAACCGGCACGGGCGTCAACGGCATCGGCAGGTTCCATTACAGCACGAATAATTTTGATTGCTACGGCGTGCTGGAAGTCACGCCGCAGATTAATTTCAGCGGCGCGTTTTTTGTCCGGCCGAACTTGATGGATAAGCCCGAGGAAAACCGTTACGTCCCGCCGGATGCGCCGTGGCAGGCGTATCAAGGCGAACGGCTGCCGGTCGCCGCCAGCGATCCGCTGGCCACGGACGACGCGCCGTTTCGCGGCAAAGCGCTGTTTTGGGTGACGCGTTACGGAAATTTTCTGATCGGCATCAACCGCAGCACCACGAAAACCTACCAATTGCAAACGCCGGCGGATTTTGTTTCCGCGACCAATCTAATAACCGGACAGGACATGAGCGGGATGATTTACGTCGCGCCGCAGTCCACGGTGGTCTTGTATTTGAATAGTGCGACGAATAGCAAACCAGTGCCGTTGGCGCCGTTGTCGCTGGATGCCGTCGGCAACCCAACGCCAGCGATTGCGCTCAACTGGAGCGCCGCCTCAGGTGCGACCGGCTACAACGTCAAGCGCGCGACGGCCAGCGGCGGACCTTATACAACCATCGCCAACGTCACGACGACCAATTACACCGACGCCGGCATGAGTCCCGGCGTGACTTATTACTATGTCGTTTCCGCGACGAACGCCAATGGGGAGAGCGATTATCATTCCATGCAAGCGAGCGCCAGCGCGGGTCTGCCGTCGCCGTGGCGGGACACGGACATCGGCAGTGTGAGTGTCGCCGGAAGCGGGGATTACAACAATGGCGTGTTCACGATCAGCGGCGAAGGCTTCGACATCGGCAGTTCCTCCGATTCTTTGAATTTCGGCTATACGACCATGACCAACGACGGCGTGTTCGTTGCGCGGCTGGCGGTGGAGCAGTTCGGCGGCAGTGCGGACGACAAGGTTGGCATCCTGTTCCGCGAAAGCACCAATGCCAATTCCAAGATGGTCGCCGTGCTGATTGATGGGGCGCAAGGAAAGGCGCGCTTTCCGTCGCGCACGGGCACCGGCGGCAACATGAGCTGGATTGACGGTCCGGCCGTGAGCGCGCCGGAATGGTTCAAACTTCAGCGCAGCGGGAATACTTTTACCGGTTATGTTTCGGCCAACGGCGCGGACTGGACTGGCGTGGGCACCAACACGTTCACGATGAACAGCGTGTTGCTGGCGGGTTTTGCCGTTTGTTCCCGCAACACCGGCACCCTGAATGTTTCCACGTTTGACACCGTCTCGCTGCCAGGCTGGACGCCGCCGCCGTCCCCGCCGGCGAATCCCTCCGCGTCCGCCACCAATGCGCAGGTGAACCTGAAATGGAACGCCCCGACCAACGCGACGGGTTACCGCGTCAAACGCGCGCTGGTTTCCGGCGGAGCCTACACGCCGCTGGCCGCCACCAGTTTCACGAACTTCGCGGACAACGGCGTGGCCAACGGAACGATCTATTATTACGTGATCACGGCGACGAACCGCGCGGGCGAAAGCGCGGATTCCAGCGAAGTCAACGCCCGGCCGGAGTCCTCGGTGGCGCCGCCGTTGACGTTTCTGAACGGCGGCGGTCAGGTTCAACTTTCCTGGCCGCTCGACCATCTGGGCTGGGAACTGCAAATGCAGACCAACTCAACCGGGGCCGGGTTGAGCACCAACTGGGCGGCGGTGCCCGGTTCCACCGCGACCAACCGGTTGTGGCTGGCGGTCAATCCGGCTGCCGGCAGCACGTTTTTCCGGCTGATTTTGAATCCATGA
PROTEIN sequence
Length: 1248
MPLLEKIMTCLNNFFARWLFVLLAGGVMSAAAQTYLDTIIFGNTASETSHAFAGANSFVITNTSVSPAQTARRGSTNNPATVNGGSLTFTLAVDPVWRSYFTVKLWGGDDVSPSSGQDNDMGRLYLYVAASNFVAGASTNYQIGYRHEGDYICLNAAAYKPPLPGRFFYSTTILPLWMTQGRTNLTLTIQPCGRIYDLGSGGPPSGNYQFNMITNSRAIYQAYTHTEPALCPNGEVQGVAPATITRTATGSASVSTLSPGGSFYNGVSNYLSGRMSTSIKNFKVNDFLQLGKAYFLSNFPVTYTNPALVTKFIAAVDYYASNYYANPSVVNGWGGNYGPIGWGIHLLAPELQSSLDVTNNYGTGGNVSRRQAWGDMLLASRDYGRFHRNTLSNQGLISGSYIYMANRALLDLTNASAFAETNAQRYLLEAIGLAPWLGDDLPGGGSDYLHGTNYFQVTPKGLTREWGYVGASYGEMQFYAADFYAWTTNPVFLAQAVKMTKARANFRRPAMEVSGGSYYRCMEGIGLLSWRGAVESDSEFADEICYGDRSGWDLGMHCAAVTGDTNLIGYAKQMLADNQYFNSLSGGGSIGNQGDSRDALDVFNDYKIVSAAPDSGVRLPMTDGQPDFAWADEEDGIVAIKHGNERLWLETYWQAKTGTGVNGIGRFHYSTNNFDCYGVLEVTPQINFSGAFFVRPNLMDKPEENRYVPPDAPWQAYQGERLPVAASDPLATDDAPFRGKALFWVTRYGNFLIGINRSTTKTYQLQTPADFVSATNLITGQDMSGMIYVAPQSTVVLYLNSATNSKPVPLAPLSLDAVGNPTPAIALNWSAASGATGYNVKRATASGGPYTTIANVTTTNYTDAGMSPGVTYYYVVSATNANGESDYHSMQASASAGLPSPWRDTDIGSVSVAGSGDYNNGVFTISGEGFDIGSSSDSLNFGYTTMTNDGVFVARLAVEQFGGSADDKVGILFRESTNANSKMVAVLIDGAQGKARFPSRTGTGGNMSWIDGPAVSAPEWFKLQRSGNTFTGYVSANGADWTGVGTNTFTMNSVLLAGFAVCSRNTGTLNVSTFDTVSLPGWTPPPSPPANPSASATNAQVNLKWNAPTNATGYRVKRALVSGGAYTPLAATSFTNFADNGVANGTIYYYVITATNRAGESADSSEVNARPESSVAPPLTFLNGGGQVQLSWPLDHLGWELQMQTNSTGAGLSTNWAAVPGSTATNRLWLAVNPAAGSTFFRLILNP*