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berkeley_reactor_200306_planktonic_scaffold_158606_183

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(244319..245398)

Top 3 Functional Annotations

Value Algorithm Source
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 358.0
  • Bit_score: 511
  • Evalue 6.50e-142
3-dehydroquinate synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL61_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 358.0
  • Bit_score: 511
  • Evalue 4.70e-142
aroB; 3-dehydroquinate synthase similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 341.0
  • Bit_score: 343
  • Evalue 6.20e-92

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1080
ATGCGCGTCGTTCACGTTCCCCTGGGAAATCGCAGTTACGTCATCAAGGTCAGCGCCGGATTGTTATCCCGGCTCGGAGTGGAGTGCGCCCAACTGAAACTGGGCCCGCGCTGTGCCGTCATCACGGATGCCAACGCGGGCAAATATTTCGCCCGCACCGCGCTCAAATCCCTTGCCGCCTCGGGCTTTGATCCGGTGCTCATCACGGTTCCCGCCGGGGAAAAATCCAAACGCATGGCCGTCGTCGAGGACTGCTACGACCAGCTCGCCGCGCACCGTTTGGAGCGGAAATCTTTCATCGTCGCGCTCGGCGGCGGCGTGGTGGGGGATCTGGCCGGCTTTGTGGCGGCCACGTATTTGCGCGGCATCCCGTTTGTGCAGGTGCCAACCACCCTGCTGGCGCAGGTGGACAGTTCCGTCGGCGGAAAAACCGGCGTGAACCTGAAGTCCGGCAAAAACCTTGTCGGGGCATTTTACCAGCCGCGCCTTGTGCTTTGCGATTTGAACGTCTTCGATACGCTTCCCAAACGGGAATATGTTTCCGGCCTCGCTGAAGTCGTCAAATACGGGATCATTTGCGACGCCATTCTCTTCGCCCAACTCGAACGCAATCTTCCCAAACTGCTGCGCCGCGATGAATCCATGCTGCGTTCGGTCATTGCCCGCTGCTGCGAAATCAAGGCGGATGTCGTCGGCCAGGATGAACGGGAGAGCGGTCTGCGCGCGATCCTGAATTTCGGCCACACCATCGGCCACGCCATAGAGAACAGTTCGGGTTACGGAAAATTTTTGCATGGCGAGGCCATCGCCATCGGCCAGGTCGCCGCCGCCAAACTCTCGAACAAAATCCTGGGGCTGCCGTCCGTGGATGTGGCGCGCGTCGAAAAATTATTCAGCCAGGCCGGCCTGCCCGTAAAAATCAAGCTGGCTGCCGCGCGCCGCAAAAAATTGTTCGCCGCCATGAAGCTCGACAAGAAAGTCAGCGGCGGCGAAATCAAATTCGTGCTCGCGCAAAAAATCGGCAAGGTGGTTTGGGGGCAGAAGGTGCCGGCGACGATGATTGATCAAGTGCTGCTTTGA
PROTEIN sequence
Length: 360
MRVVHVPLGNRSYVIKVSAGLLSRLGVECAQLKLGPRCAVITDANAGKYFARTALKSLAASGFDPVLITVPAGEKSKRMAVVEDCYDQLAAHRLERKSFIVALGGGVVGDLAGFVAATYLRGIPFVQVPTTLLAQVDSSVGGKTGVNLKSGKNLVGAFYQPRLVLCDLNVFDTLPKREYVSGLAEVVKYGIICDAILFAQLERNLPKLLRRDESMLRSVIARCCEIKADVVGQDERESGLRAILNFGHTIGHAIENSSGYGKFLHGEAIAIGQVAAAKLSNKILGLPSVDVARVEKLFSQAGLPVKIKLAAARRKKLFAAMKLDKKVSGGEIKFVLAQKIGKVVWGQKVPATMIDQVLL*