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berkeley_reactor_200306_planktonic_scaffold_204825_56

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(62923..63861)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D612_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 293.0
  • Bit_score: 331
  • Evalue 5.70e-88
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDY18215.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 293.0
  • Bit_score: 331
  • Evalue 8.10e-88
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 305.0
  • Bit_score: 184
  • Evalue 3.20e-44

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 939
ATGGAACTGCGCCATCTCCGTTATTTCGTCGCCGTGGCCGAGGAGGAAAATGTCTCCAAGGCGGCGCTCAAGCTGCACGTCTCGCAGCCGGGCATCAGCCGGCAAATCCGCGATCTGGAGGAAGAAATCGGTTTTCCGCTGTTTGAACGCAGCGCGAAATCCGTGCGGCTGACGGCGGCGGGAAAAGTGTTTCTCGCCGAGGCCCGGGAAGTGTTATTGCACGCGGAGGAAGCGGTGAAAAAGGCGCGCGCAGTTTCCGGCGGTGTCAGCGGCGAAATCCATGTCGGCTACGCGCCGTCGCTCACGGTGCAGATTTTGCCGCCGGCGTTGCGCGCGTTTCAGGATCAGTTTCCGCACGTGCGGGTGATCCTGCACGATTTGTCCACGGAAGAAATGCTGGCGCAACTGGGCGAAAAGAAATTGCACGTGGCGCTCACGGTGCGTCCGCCGGCCAAACAATTGCGCGGAATGCGTTTTAAGGAATTGGCGCGTTACGCCGCGTGCGTGGCGGTGACGCCAAAACATCCGCTGGCAAAGGCCAAATTCATCACTCTGGCGCAGATGGCGGCCGAACCGCTGATCGCTTACACGCGCAAGGATTATCCCGAGTATCACGCAATGCTGGGCAAGCTGTTGGGCGCGGTCGGACGCAAGCCGCGCATCGTGGGAGAACATGACGGCGCCAGCAGCTTGATTGCAGATGTCGAGTCGGGCCGCGGCATCGCGCTCGTTCCGGCATGTCTGTCGTGCATGGTGGGGACGCGGTTGAAGCTGGTTCCGCTGAAAGACGGCCCGCCGCCGATTCCGGTCGCGGCGATTTGGCGGGCGGAAAACGGCGGGTCCTTGGTGGAACACTTTGTGGCGGCGGCTGCGCGGCAAATCCATGACCGGGAATTCACGCAGAGGCGCGGCGAACGCGGCGGAAACGCGGCGATGTGA
PROTEIN sequence
Length: 313
MELRHLRYFVAVAEEENVSKAALKLHVSQPGISRQIRDLEEEIGFPLFERSAKSVRLTAAGKVFLAEAREVLLHAEEAVKKARAVSGGVSGEIHVGYAPSLTVQILPPALRAFQDQFPHVRVILHDLSTEEMLAQLGEKKLHVALTVRPPAKQLRGMRFKELARYAACVAVTPKHPLAKAKFITLAQMAAEPLIAYTRKDYPEYHAMLGKLLGAVGRKPRIVGEHDGASSLIADVESGRGIALVPACLSCMVGTRLKLVPLKDGPPPIPVAAIWRAENGGSLVEHFVAAAARQIHDREFTQRRGERGGNAAM*