ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_198771_59

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(69367..69648)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000364586D similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 88.0
  • Bit_score: 151
  • Evalue 3.20e-34
carboxysome shell protein similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 91.0
  • Bit_score: 129
  • Evalue 4.80e-28
Carboxysome shell protein {ECO:0000313|EMBL:AHF89556.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 91.0
  • Bit_score: 129
  • Evalue 2.40e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Opitutaceae bacterium TAV5 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 282
ATGCCTCAAGCCATTGGAATGATTGAAACGCGCGGACTCGTTGCCCTCGTCGAGGGGACGGACGCCATGCTCAAGGCCGCGAACGTCGAACTCGTCGGCCCGATGACCCAGGTCGGCAACGCGCTCGTCACCGCGTGCGTCGTTGGCGATGTCGCCGCCGTCAAGGCCGCGACCGATGCCGGCGCGCAGGCCATCAAAGCCATCAAAGGCGAACTGGTCAGCGTCCACGTCATCGCCCGCCCGCACAACGATGTGGAAGCGGTGTTGCCGAAGAAGAAGTAA
PROTEIN sequence
Length: 94
MPQAIGMIETRGLVALVEGTDAMLKAANVELVGPMTQVGNALVTACVVGDVAAVKAATDAGAQAIKAIKGELVSVHVIARPHNDVEAVLPKKK*