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berkeley_reactor_200306_planktonic_scaffold_198771_62

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(71473..71763)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000380D1A7 similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 88.0
  • Bit_score: 146
  • Evalue 1.40e-32
carboxysome shell protein similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 86.0
  • Bit_score: 136
  • Evalue 4.00e-30
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:EIQ00028.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 86.0
  • Bit_score: 136
  • Evalue 2.00e-29

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Taxonomy

Opitutaceae bacterium TAV1 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 291
ATGAGCGAAGCAATAGGAATGATTGAAACCAAGGGCTACGTTGGCAGCGTGGAAGCCAGCGATGCCATGGTCAAAGCGGCCAACGTCACGTTGGTCAAAACGGTCGCCATCGGCGGCGGACTGATCACCGTCATCGCCAAGGGCGACATCGGCAGCATCAAAGCCGCCGTGGACGCCGGCGCCAAGGCCGCCGCGAAAGTCGGCGAACTCGTCAGCAGCCACATCATCGCGCGTCCGCACGAGGAACTGCTCGAAGCCTTCATCGGCAACGGCGTCGCCGCGAAGAAATAG
PROTEIN sequence
Length: 97
MSEAIGMIETKGYVGSVEASDAMVKAANVTLVKTVAIGGGLITVIAKGDIGSIKAAVDAGAKAAAKVGELVSSHIIARPHEELLEAFIGNGVAAKK*