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berkeley_reactor_200306_planktonic_scaffold_198771_94

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 111654..112388

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 244.0
  • Bit_score: 381
  • Evalue 6.90e-103
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSF7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 244.0
  • Bit_score: 381
  • Evalue 4.90e-103
dihydrodipicolinate reductase similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 242.0
  • Bit_score: 294
  • Evalue 1.70e-77

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 735
ATGACAAAAATCATCATCACCGGTTCCAAGGGCCGCATGGGCCAGATGTTGCTGAATTGCGCCGCCCGCATTCCCGAACTCGAAGTGGTCGGCACCATTGACCAGGGCGACGATTTGGGCGCCGTCATTGACCGGGCGGATGCGGTGATCGAATTCAGTTTCCACAGCGCCACGCTCGGGATTGCGGAAGTGTGCGCCCGGCACCGAAAAGCCATCGTCATCGGCACCACCGGCCACAGCGCGGACGAGAAAGCCAAAATCGTCGCCCTCAAATCCCAGATCCCGATGGTCATGGCCTCGAATTTTTCCACCGGTGTGAACACGCTCTTCTGGCTTACCCGCAAGGCGGCGGAAATTCTCGGGCCGAACTTTGATTTGGAAGTGGTGGAGATGCACCATCGGCTCAAGAAAGATGCTCCCAGCGGCACGGCCACGACCTTGCTCGAAATTCTGGCGGACGTGCGCAAGCTGCAGCTAGAGGATGCGCTGCGGCACGGCCGCCAAGGCATCACCGGCGAACGCACGCAAAATGAAATCGGCATTCACGCCCTTCGCGGCGGCGACGTGGTGGGTGATCACACGGTCATTTTTGCCGCCACCGGCGAACGGGTGGAATTGACGCACAAAGCCTCCAGCCGTGAAACTTTCGCCCACGGCGCGCTCCGCGCGGCGCAATGGGTGGTGCCACAAACGCCCGGTCTCTACGACATGCAGGACGTGCTGGGATTGAAATGA
PROTEIN sequence
Length: 245
MTKIIITGSKGRMGQMLLNCAARIPELEVVGTIDQGDDLGAVIDRADAVIEFSFHSATLGIAEVCARHRKAIVIGTTGHSADEKAKIVALKSQIPMVMASNFSTGVNTLFWLTRKAAEILGPNFDLEVVEMHHRLKKDAPSGTATTLLEILADVRKLQLEDALRHGRQGITGERTQNEIGIHALRGGDVVGDHTVIFAATGERVELTHKASSRETFAHGALRAAQWVVPQTPGLYDMQDVLGLK*