ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_198771_115

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(143537..146317)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00035D9785 similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 574.0
  • Bit_score: 510
  • Evalue 2.00e-141
Putative heavy metal translocating P-type ATPase {ECO:0000313|EMBL:BAL99273.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 575.0
  • Bit_score: 408
  • Evalue 2.00e-110
ATPase P similarity KEGG
DB: KEGG
  • Identity: 32.6
  • Coverage: 947.0
  • Bit_score: 404
  • Evalue 7.60e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caldilinea aerophila → Caldilinea → Caldilineales → Caldilineae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 2781
ATGACACCGTCATCCGTCACCACTGATCTGCACGTCACCGGCTTGACCTGCAACAACTGCGCCCGCAAGGTCACCGACGCGGCGCAACGCGTTCCCGGTGTGCACAGCGTTTCCGTGAACCTCGGCGAAGAACAAGCCAGCATCCGCTGGAATTCGGGCGAGGCAAAAAATGTTTCCGCCGCGATTGCCGCCATCACCGCCGCCGGATATGCGGCCAAGGAAATTCAAATCCAAAAGCCGGAGTCCGGCACGACTGAATTGCTCGTCAGCGGCATGACCTGCAACAACTGCGCCCGGCACGTCACCGAGGCGATTCAAAACGTGGCCGGCGTGCGCAGTGCGTCCGTGGCCCTGGAGGCCGGGCGGGCGACAGTGCGTTGGGAAAATGCCCCGGATGTCGCCGGGGTAATCGCCGCTGTCGCGCAGGTCGGTTACGAGGCCAAACCCGTGGAAGCCGCGCACGATCATGGCGGACAACGTCGTTCGCGCTGGCAATGGAACTTGATCTTGGGCCTGGGCGTCACCGGTTTGTTGATGATTGGCGAATGGATTTTTCACCTCGCGATGACGTCGTGGTTTCAGTGGACAGCGTTTGCGCTCGCGGGGGTGGTGCAGATTTTTTGCGGCGCGCAGTTTTATCGCGGCGCGTGGCGGCAGCTCAAGGTCGGCCAGTCCAACATGGACACGCTCGTGGCGCTCGGCTCGACGACGGCGTTTGGTTACAGCACGTGGGCGCTGTTGAGTGGCGCGGGCGGGCATTTGTATTTCATGGAAGCGGCGGCCATCATTTCGCTCATCAGCATTGGCCATTGGATTGAAGCGCGCGTCAGTGAGCGAGCCAGCGGGGCGCTGAAATCGCTGTTGAATCTGGCGCCGCAGACGGCGAGGAGAATCGTTTCCCCTCACCCTGCCCCTCTTCCTCGGGGAGAGGGAACAGCCACGACCGCCGCTCGCAAACTGATGGCGTTCGGTTCCAATCCCGCGCGGGATCGAGTTCTCCCTCTCCCGGCGGGAGAGGGCCGGGGTGAGGGGAATCTAAACCTCAAAAACCTGCACTTTGCCAAATCGGAAACTCCCTCCGGAGGGGCGCCAAATCGCAAATCCGAAATGGAAGAAGAGATTCCCGTTGCCGAACTGAAAGCCGGCGACCGCGTGGCGTTGCGTCCGGGCGACCGCGTGCCGGTGGATGGCGTGGTGTTGGCCGGCGAATCCGCCGTGGACGAAGCCATGCTCACCGGCGAAGCGGTTCCGGTGGATAAAAAAACCGGCGACGAACTTTACGCCGGCACCGTCAACCAAAACAGCCGGCTGGTCATGCGCGTCACCGCCACCGGCGACGGCACGGCGCTGACCAGCATCATCGCCGCCGTGCAACGCGCCCAAACCAGTCGCGCCGACATCCAACGTCTTGGCGACCGGATCAGCAACGTGTTCGTGCCCGTCATTATCTGCGTGGCGCTCGCTGCCGGATTGTGGTGGGGGCTGGCGCCGGAGTCGGCGGGGCGCGTTCATGAATTTCTCGCCCGTATTTTGTGGGCGGCCCACGCGCCAATCGGGGTGGCGGCGGGATTCATCGTGGCGGCGGCGGTTTTGATTGTGGCCTGTCCGTGCGCGATGGGTCTGGCCACGCCGGCGGCCATCATGGCCAGCGCCAACGCCGCCGCCAAACGCGGCATTTTGATTCGCGACGGCGTGGCGCTGGAAAAAGCCGGTGAAGTGACGGCGGTGATTTTTGACAAGACGGGAACGCTGACGATGGGCAAGCCGGAGGTGGCGGCGATGGTCCGCGTTTCCCCTCACCCTGACCCTCTCCCGCGGGGAGAGGGAACAGCCACAATGACGTCTCGCAAACCGAACGCCAACGATTCCAATTCAGCGCTGGATCAACTTTTCCCTCTCCCCGCGGGAGAGGGCCGGGGTGATGGGAACAAGATCAAGGAAATCGCCGCTGCACTCGCCCGCCATTCAACGCATCCGCTCAGCCAAGCGATCGCGAAAATTTCGGATGAGCAGGTTGAAATTTTTGACTGGCAGGAAATTCGCGGGGCCGGCGTGGCAGCCAAATCGGAAATCGGAAATCGGAAATCGGAAATGCTCCGCCTCGGCTCGTTGCGCTGGCTGAAGGAAAGCGGTGTGGACTTGGCGGCGGGCGAACCATTCATTGCGGAGTGGTCGCAGCAAGGCGCGACCATCGTCGGGCTGGCGTCGGAAAAAATGTTGCTGGCTCTGTTCGCCGTGCGCGATTCCGTGAAAGCCAAAGCGCCGGAAGTCGTCGGCAATTTGCAGCGACAGGGCTTGAAAACCTTTTTGCTGACGGGCGACAACGCCATCACGGCGGCCGCGATTGCGAAACAAACCGGCATTGCCACGGACAATGTTTTTGCCGAGGTAAGACCAGAAGAGAAGGCGGAATTCGTGAAGAAACTTCAGTCGCAGGGTGAACGCGTGGCGTTTGTGGGCGACGGCATCAACGACGCCCCGGCCCTCACGCAGGCCGAGCTAGGCATCGCCGTGAGCCGCGCCAGCGACGTGGCGCGCGAGGCGGCGGACATCATTTTGCTGAAATCGGAAATCGAAGCCGTGCCGGAAGCGCTGGGTTTGGCGCGGGCGACCTTGCGCACCATCAAACAGAATTTGTTTTGGGCGTTTTTCTACAACGCGCTCGGCGTGCCGCTGGCCGCGCTGGGTTTCATCAGCCCGATTCTGTGCGCGGCGGCGATGGGATTTTCGGACATCATCGTCATCGGCAACGCGCTGCGGCTGTTGCGGTGGCGGCAGTGA
PROTEIN sequence
Length: 927
MTPSSVTTDLHVTGLTCNNCARKVTDAAQRVPGVHSVSVNLGEEQASIRWNSGEAKNVSAAIAAITAAGYAAKEIQIQKPESGTTELLVSGMTCNNCARHVTEAIQNVAGVRSASVALEAGRATVRWENAPDVAGVIAAVAQVGYEAKPVEAAHDHGGQRRSRWQWNLILGLGVTGLLMIGEWIFHLAMTSWFQWTAFALAGVVQIFCGAQFYRGAWRQLKVGQSNMDTLVALGSTTAFGYSTWALLSGAGGHLYFMEAAAIISLISIGHWIEARVSERASGALKSLLNLAPQTARRIVSPHPAPLPRGEGTATTAARKLMAFGSNPARDRVLPLPAGEGRGEGNLNLKNLHFAKSETPSGGAPNRKSEMEEEIPVAELKAGDRVALRPGDRVPVDGVVLAGESAVDEAMLTGEAVPVDKKTGDELYAGTVNQNSRLVMRVTATGDGTALTSIIAAVQRAQTSRADIQRLGDRISNVFVPVIICVALAAGLWWGLAPESAGRVHEFLARILWAAHAPIGVAAGFIVAAAVLIVACPCAMGLATPAAIMASANAAAKRGILIRDGVALEKAGEVTAVIFDKTGTLTMGKPEVAAMVRVSPHPDPLPRGEGTATMTSRKPNANDSNSALDQLFPLPAGEGRGDGNKIKEIAAALARHSTHPLSQAIAKISDEQVEIFDWQEIRGAGVAAKSEIGNRKSEMLRLGSLRWLKESGVDLAAGEPFIAEWSQQGATIVGLASEKMLLALFAVRDSVKAKAPEVVGNLQRQGLKTFLLTGDNAITAAAIAKQTGIATDNVFAEVRPEEKAEFVKKLQSQGERVAFVGDGINDAPALTQAELGIAVSRASDVAREAADIILLKSEIEAVPEALGLARATLRTIKQNLFWAFFYNALGVPLAALGFISPILCAAAMGFSDIIVIGNALRLLRWRQ*