ggKbase home page
Advanced Search
Search Help

berkeley_reactor_200306_planktonic_scaffold_198771_129

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(159968..164281)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
glycogen debranching enzyme/alpha-amylase (EC:3.2.1.1) similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 1482.0
  • Bit_score: 1042
  • Evalue 0.0
Amylo-alpha-16-glucosidase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZ42_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 1466.0
  • Bit_score: 1484
  • Evalue 0.0
Glycogen debranching protein {ECO:0000313|EMBL:KJS30649.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp. BRH_c12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 1470.0
  • Bit_score: 1086
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfatitalea sp. BRH_c12 → Desulfatitalea → Desulfobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4314
ATGACTCCCGTCCCCGGCGAACGCCTGTTGCGGTTCGTCGGCGATAAAATCATTTTCACCCTCCGCGACGAACGTCCCTCCGGCCGGCGCAAAAACTGGCAGGCCCGCCTCCGCACCAATCTCGGACGCGCCGCCATCCGCCGGCGCGAAATCATTTCCGCCCACGCCGGCGGCGCCGCCTTCGCCGGCGCCTCGTGGCGCGATCTGCCCATGCAGCCAACGACGGACGGCTGGCAAATCGAACTGCCGCTCGCGGAAGTCGGTTTTTTCAAGGCCAAGGCCTACCTGCTGGACGAAAAAAATTGGCAGCACTGGCCCGGGGGGGAAGACGTCGGCGTTTCCGTGCATCCCGATTTCACCCGCACGGCCAATACGATTTATTGCGCCTTCACCCGGCTGTTCGGCGCCACCAAACAACTGGCCGCCACCGCCAACGCCCAGTTGGATGCCCGGTTAAAAGCCCTCGAAGCCGAAGGCTACGCCACGCTGCCGCCCTCCGGAAAATTTCGCGATTTAACCGCGCTGCTGCCGCACATCGTTCACCGGCTCGGCTGCCGGATCCTCCACCTGCTCCCGGTCCATCCCACGCCCACCACCTACGCGCGTTTCGGACGCTACGGCAGTCCGTATGCCGCGCTGGATTTGACCGCCGTGGATCCCGCCCTCGTTGAATTCGATAAACGCACCACCGGCGTTGACCAGTTCTGCGAACTGACTTACACGGCGCATTCCCTGGGCGCGCGCGTGTTCATTGACATCGTCATCAACCACACCGGCTGGGGCTCGGTTTTGCAGGAAAATCATCCCGAATTTTTCCTGAAAAAACCGGATGGCGAATTCGCCAGTCCCGGCGCCTGGGGCACGGTCTGGGAGGATCTGGTGGAATTGGAACAGCAGGATGTCGCGCTTTGGGACACCCTCGCCAACGCCTTGATCATCTGGTGCCAGCGCGGGGTGGACGGTTTCCGCTGCGACGCCGGCTACAAAATTCCCACCAAGGCGTGGCAATACATCATCGCCCGGGTGCAGGAGGAATTTCCCGAAACCCTCTTTCTGCTCGAAGGTCTGGGCGGTTCCTGGGACGCCACGGAAGCGCTCCTCACGGAAGGCGGCATGCACTGGGCTTACTCCGAATTATTTCAGAATTATTCCGGCCGCGAGGTCGCCGGCTATCTCGACTACGCCAGCCGGCAAAACGAACGCGTCGGCAGCTACGTGCATTATTCGGAAACGCACGACAACAACCGGCTCGCGGAAAAAGGCCGCGCCTGGTCGCTCCTGCGCAACCGCCTCTGCGCGCTCACCAGTCCGCAGGGCGGATTCGGTTTCACCGGCGGCGTCGAATGGCTGGCCACCGAGAAAATCCGCGTCCACGGCAACACCGGATTGAACTGGGGTGCCGACGAAAACATCGTCCCCGAACTGGCGCAGCTCAACCGGCTCATCGCCGATCATCCGTGCTTTTTCGACGGCGCCAAACTCACGCGCCTGAGCCCGCCCGAATCGGCCGTTTATGCGCTGCTCCGCGAATCGGCCGACGGCAAAGACTCCGTGCTCGTGCTCGTCAACACCGAGATGGCGCAAGCGAGTGCCGTCACGCTGGCCGCGCCGGCCGCCGGTAATTTTCCCCTGACCACGGATCTGCTCGGGCAGGCACTTCCCCAAATCACTTCCGAAAACGAAGGCCTTCAGTTCACCCTCCTGCCCGGCGCGGTCCATTGTCTGGCCGCCGCCGAACAGCCGGCCGGTTTGAGCGGCGAGGATTATCGCCAGGCGCGCGCCCGGGCCGCGTTTGCGATCCAGGCGCTCAACCGGGTTCTTCCCGTGGAAGTCGTGGATGGACTTGACTGGCGCTGGCTGGCGGAGCAGGTGCGCCGTTCGCCCCAAAATTTTCTCGCCGCCGCCAGCGAATGCGCCGCCCGCAACGCCGCGAATCCGCTGCCGGATGTGCTCGCGGAGGCCGGGGCCGGAAACGTGCTGCCGCGCGTCATCGGCTGGACCTTGCTGGATGCCCGCCGCATCACGCCGGTGCCTCCCGGCCATTGGTTGCTGGTCGAGGATTCCGCGCCCTTCCGCGCCTCGCTTTCGTTTCAACCGGCCGCAACCGGCAGCCGGCCGTCCGTCCACGTGCAATCCATTTCCCTCGGCGACCGCCATGTCGCCTGCTTCGCCCCGCGCGAAACGTTTGCGGAGGCGGAATTGAATTTGGAACGCTACGCAACCACGTCGCAAAAAGTGCGGGGCGCCATCCGATTTCTTGATTTCCCGCCTGCCCCTTCCCGCCTTCGGCCGCAACCTGCCGACCTGGTGCTGCTCACCAACGGCATCGGCGGCATGGCGCGATTGTGCGTGGACCTGGGCCGCGTGAATTCCAAATACGATTGCGCGCTGGGCGCCAATCTGCATCCGTCCTTGCCCGTGGACCGGCACGTCTTCGTGAAACGGCTCCGCGTTTGGGTCAATGCCGACGGCTTTATCTCGCCGCTAAATTTCAGCAACCTGGCCGGCTTTGACGCCGGACCGCCGGCCGTCTGGAAATTCGTCGCCAACGCCGGCGACGGCCGCACCGTGGAAATCGAGTTGAGCGCGGAAATGGTCCCGGAACAAAACACGGTCGTCTTCACATTTCATCGGCCCGCCGCCAACGTCGCCCACGGCAAACAACTGCCCGCCGGCGCCGACGTGCGGCTGACGGTGCGGCCGGACTTGGAAGATCGCAATTTCCATTCGGAAACCCGGCGCAACGCCGGCGCGGAAGTTCATTTCACGTCGAATACGCATTTGCTGCCGCGGCCGGACGACGCGTCCGCCGCGCCGCCCGGTTTTGCCTTCACCCCGGCGGCCGACCGGCAGCTCCGCGTTTTCGCGGATTCCGGCGCGTATCATCCGCAGCCCGAATGGTGCGAACGCATTCCCCATCCCGTCGAGCAAACCCGGGGCCAGACCGGCAGCGGCGATGCCTACAGCCCCGGCTGGTTTGACCTGCCGCTGGCCAAAGGCGCGACGGCCACGCTCGTTCTCACCGCCGAATTGGCCGCCGCCGGCCTCCCGGCGCAACGGCCGCCGGCCCGCCGCGAACCGAAGCCGCTTTCCCCGGCGGCCGCCGAAGCCGGGTTTGCATCCCGCCTCGTCCAAGCCGCCCGACAATTCGTTGTCCGCCGCGACGCCGGCAAAACCGTCATCGCCGGCTACCCGTGGTTTCTCGATTGGGGCCGTGATTCGCTGATCTGCGCGCGCGGCCTGCTCGCCGCCGGATTCACCGACGACGTGAAAGACCTGCTCCTGACCTTCGCCCGGTTCGAGCAAAACGGCACGCTGCCCAACACGATACATGGCGCTGACGTTTCCAATCGCGACACCAGCGACGCGCCGCTGTGGTTTGCCGTGGTGTGCGAGGAATTGGGCGATGCAACCTTTTTCAACGCCTCCGTCGGCGGGGCCCGCACCATCCGCGACGTGCTGGCCAGCATCGCGGAGAATTACGGCAAGGGCACGCCCAACGGCATTGGCATGGATGTCGAATCCGCGCTGATCTGGAGCCCCGCCCATTTCACGTGGATGGACACGAATTATCCCGCCGGCACGCCGCGGGAAGGCTATCCCGTCGAGATTCAAGCCCTGTGGATTCGCCTACTGCGTTTGCTTGAAAAAATCAGCGACCCGCCCGGCCGGAAAAAATGGCGGGCGCTGGCCGACCACGCGACGGACTCCTTTGAAAAATTATTCTGGCTGGAAGACAAGGGCTGGTTCGCCGATGTGTTGCTTGCCCCACCACGCGTCGGCGCCCGCGAGGCCGTCCCAAGCGATGCGTTGCGGAGCAACTGTCTGCTGGCGGTGAGCCTCGGGCTGGTGGCCGGCGAACGCGCGCAACGCTGCGTGGCCGCCGCGCAAAAATATCTGGTGATCCCCGGCGCCCTGCGTTCGCTCGCGCCGCTGCCGGTGTCCGTTCCCCAGCCCATCTGGCGCGACGGCCAGTTGATGAATGACCCGCACGAACCATATCGTCCACGCTATGAAGGCGACGAGGACACCAGTCGCAAGCTGGCGTATCACAACGGCACCGCGTGGACCTGGACGTTCCCGGCGTTTTGCGAAGCGCTCGCGCTGGCCTGGAATTTTTCCCCGGAAGCCGTTGCCAGCGCCCAGGCCTACCTGGCGGGCGCGGAACCGATTTTAAACGCGGGCTGCCTCGGCCAGCTTCCCGAAATCCTCGACGGCGACGCGCCGCACACGCAGCGCGGCTGCGACGCCCAGGCGTGGAGCGCGACGGAATTTTTGCGCGTTTGGAAACGGCTGGCTTCAGTCACCAGTTGA
PROTEIN sequence
Length: 1438
MTPVPGERLLRFVGDKIIFTLRDERPSGRRKNWQARLRTNLGRAAIRRREIISAHAGGAAFAGASWRDLPMQPTTDGWQIELPLAEVGFFKAKAYLLDEKNWQHWPGGEDVGVSVHPDFTRTANTIYCAFTRLFGATKQLAATANAQLDARLKALEAEGYATLPPSGKFRDLTALLPHIVHRLGCRILHLLPVHPTPTTYARFGRYGSPYAALDLTAVDPALVEFDKRTTGVDQFCELTYTAHSLGARVFIDIVINHTGWGSVLQENHPEFFLKKPDGEFASPGAWGTVWEDLVELEQQDVALWDTLANALIIWCQRGVDGFRCDAGYKIPTKAWQYIIARVQEEFPETLFLLEGLGGSWDATEALLTEGGMHWAYSELFQNYSGREVAGYLDYASRQNERVGSYVHYSETHDNNRLAEKGRAWSLLRNRLCALTSPQGGFGFTGGVEWLATEKIRVHGNTGLNWGADENIVPELAQLNRLIADHPCFFDGAKLTRLSPPESAVYALLRESADGKDSVLVLVNTEMAQASAVTLAAPAAGNFPLTTDLLGQALPQITSENEGLQFTLLPGAVHCLAAAEQPAGLSGEDYRQARARAAFAIQALNRVLPVEVVDGLDWRWLAEQVRRSPQNFLAAASECAARNAANPLPDVLAEAGAGNVLPRVIGWTLLDARRITPVPPGHWLLVEDSAPFRASLSFQPAATGSRPSVHVQSISLGDRHVACFAPRETFAEAELNLERYATTSQKVRGAIRFLDFPPAPSRLRPQPADLVLLTNGIGGMARLCVDLGRVNSKYDCALGANLHPSLPVDRHVFVKRLRVWVNADGFISPLNFSNLAGFDAGPPAVWKFVANAGDGRTVEIELSAEMVPEQNTVVFTFHRPAANVAHGKQLPAGADVRLTVRPDLEDRNFHSETRRNAGAEVHFTSNTHLLPRPDDASAAPPGFAFTPAADRQLRVFADSGAYHPQPEWCERIPHPVEQTRGQTGSGDAYSPGWFDLPLAKGATATLVLTAELAAAGLPAQRPPARREPKPLSPAAAEAGFASRLVQAARQFVVRRDAGKTVIAGYPWFLDWGRDSLICARGLLAAGFTDDVKDLLLTFARFEQNGTLPNTIHGADVSNRDTSDAPLWFAVVCEELGDATFFNASVGGARTIRDVLASIAENYGKGTPNGIGMDVESALIWSPAHFTWMDTNYPAGTPREGYPVEIQALWIRLLRLLEKISDPPGRKKWRALADHATDSFEKLFWLEDKGWFADVLLAPPRVGAREAVPSDALRSNCLLAVSLGLVAGERAQRCVAAAQKYLVIPGALRSLAPLPVSVPQPIWRDGQLMNDPHEPYRPRYEGDEDTSRKLAYHNGTAWTWTFPAFCEALALAWNFSPEAVASAQAYLAGAEPILNAGCLGQLPEILDGDAPHTQRGCDAQAWSATEFLRVWKRLASVTS*