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berkeley_reactor_200306_planktonic_scaffold_198771

Search features with annotation key words

Displaying items 121-150 of 297 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_198771_118
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

148262..148810
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK27_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59850.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
berkeley_reactor_200306_planktonic_scaffold_198771_119
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

148985..149578
DNA (594bp) protein (198aa)
Methylated-DNA/protein-cysteine methyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK26_9BACT
Methylated-DNA/protein-cysteine methyltransferase {ECO:0000313|EMBL:EEF59849.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Methylated-DNA--protein-cysteine S-methyltransferase
berkeley_reactor_200306_planktonic_scaffold_198771_120
unknown

Not on your lists

comp(150157..150267)
DNA (111bp) protein (37aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_198771_121
unknown

Not on your lists

150848..152503
DNA (1656bp) protein (552aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_198771_122
unknown

Not on your lists

152795..153457
DNA (663bp) protein (221aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_198771_123
unknown

Not on your lists

153508..154116
DNA (609bp) protein (203aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_198771_124
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(154225..155772)
DNA (1548bp) protein (516aa)
Sulfotransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK71_9BACT
Sulfotransferase {ECO:0000313|EMBL:EEF59709.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
sulfotransferase
berkeley_reactor_200306_planktonic_scaffold_198771_125
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(155797..157341)
DNA (1545bp) protein (515aa)
Sulfotransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK71_9BACT
Sulfotransferase {ECO:0000313|EMBL:EEF59709.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
sulfotransferase
berkeley_reactor_200306_planktonic_scaffold_198771_126
unknown

Not on your lists

157526..158299
DNA (774bp) protein (258aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_198771_127
unknown

Not on your lists

158250..158648
DNA (399bp) protein (133aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_198771_128
unknown

Not on your lists

159084..159833
DNA (750bp) protein (250aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_198771_129
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159968..164281)
DNA (4314bp) protein (1438aa)
glycogen debranching enzyme/alpha-amylase (EC:3.2.1.1)
Amylo-alpha-16-glucosidase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZ42_9BACT
Glycogen debranching protein {ECO:0000313|EMBL:KJS30649.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp. BRH_c12.;"
berkeley_reactor_200306_planktonic_scaffold_198771_130
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

164427..165266
DNA (840bp) protein (280aa)
General secretory system II protein E domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRT4_9BACT
General secretory system II protein E domain protein {ECO:0000313|EMBL:EEF57445.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_198771_131
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

165269..167011
DNA (1743bp) protein (581aa)
Type II secretion system protein E n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRT3_9BACT
Type II secretion system protein E {ECO:0000313|EMBL:EEF57444.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
type IV-A pilus assembly ATPase PilB
berkeley_reactor_200306_planktonic_scaffold_198771_132
unknown

Not on your lists

comp(167026..168063)
DNA (1038bp) protein (346aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_198771_133
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(168191..168436)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI00036F0569
Regulatory protein FmdB family {ECO:0000313|EMBL:CDD94158.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
FmdB family regulatory protein
berkeley_reactor_200306_planktonic_scaffold_198771_134
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(168440..169222)
DNA (783bp) protein (261aa)
Band 7 protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRP9_9BACT
Band 7 protein {ECO:0000313|EMBL:EEF57464.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
membrane protease subunit, stomatin/prohibitin -like protein
berkeley_reactor_200306_planktonic_scaffold_198771_135
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(169237..170508)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRQ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57465.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
putative protease/transporter
berkeley_reactor_200306_planktonic_scaffold_198771_136
unknown

Not on your lists

comp(170565..170705)
DNA (141bp) protein (47aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_198771_137
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(171094..173139)
DNA (2046bp) protein (682aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRJ8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57517.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_198771_138
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(173158..173796)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRJ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57518.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
berkeley_reactor_200306_planktonic_scaffold_198771_139
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(173793..174299)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRK0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57519.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
berkeley_reactor_200306_planktonic_scaffold_198771_140
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(174714..175472)
DNA (759bp) protein (253aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCF4_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF62622.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
two component LuxR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_198771_141
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(175687..176343)
DNA (657bp) protein (219aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCF4_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF62622.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
two component LuxR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_198771_142
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(176309..177379)
DNA (1071bp) protein (357aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCF3_9BACT
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:EEF62621.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
histidine kinase
berkeley_reactor_200306_planktonic_scaffold_198771_143
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(177466..178971)
DNA (1506bp) protein (502aa)
Anthranilate synthase component I {ECO:0000313|EMBL:EEF58998.1}; EC=4.1.3.27 {ECO:0000313|EMBL:EEF58998.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
anthranilate synthase subunit I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMF6_9BACT
berkeley_reactor_200306_planktonic_scaffold_198771_144
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(179250..179783)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMF7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58999.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
berkeley_reactor_200306_planktonic_scaffold_198771_145
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(179783..180175)
DNA (393bp) protein (131aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hisI; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMF8_9BACT
berkeley_reactor_200306_planktonic_scaffold_198771_146
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(180264..181253)
DNA (990bp) protein (330aa)
TPR repeat-containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XM24_9BACT
TPR repeat-containing protein {ECO:0000313|EMBL:EEF59152.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_198771_147
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(181348..181791)
DNA (444bp) protein (148aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGL7_CHIPD
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ACU61722.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Displaying items 121-150 of 297 in total

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