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berkeley_reactor_200306_planktonic_scaffold_198771_146

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(180264..181253)

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat-containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XM24_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 331.0
  • Bit_score: 344
  • Evalue 6.90e-92
TPR repeat-containing protein {ECO:0000313|EMBL:EEF59152.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 331.0
  • Bit_score: 344
  • Evalue 9.70e-92
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 28.0
  • Coverage: 279.0
  • Bit_score: 102
  • Evalue 1.30e-19

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 990
ATGAACGAAATGACCATCGGATTACTGAGCGCCCTGCTGGCCACCAACCAGCCGCAGGCGGTAAGCAACGTCCTTCAGCAGCAAACGGGCGTGACGGTGAACCTCGCCATTGATCCAGCGGAAAAGGCATTGCGCCAGGTCATGCGTTCCGATGACGCGGCCATGGACGACGTCAACAAATGGCTCCATGAATATGACGCGCTGGACGAGACCAACAAAACCAAGGCGGCGTCCGCGGCGTTGAACGACCGCATCAAGGCGCGGCTGGACGTGGTGCGCACCGCTTACGACACGTTTCTCCGCGAACATCCCGACAGCGCGCACGGTTATCTGGCTTACGGCAGTTTCCTGGATTCCATCGGCGACGAGTATGACGCCAAAACCCAATACGAAAACGCCAGGCAGCTCGATCCCAAAAATCCCGCGGTCTGGAACAATCTTGCCAATTATTACGGCGAATTCAGCCCGGTGACGAACGCGTTTGCGTATTACGCCGAGGCCATCAAGCTCGATCCCACCGAGCCGGTGTATTACCAGAATTTCGCCACGACCGTTTATCTGTTCCGCAAGGATGCCCGGGAATTTTATCACCTCAACGAGCAGCAGGTGTTTGACAAGGCGCTGGATTTGTATCGGCAGGCCATGAAGCTGGATCCAGGCAACCTGGTGCTGGCGACCGATTACGCGGAAAGTTATTACGGCATCAAGCCGATGCGCACCAACGACGCGCTGGTGGCGTGGACGAATGCGCTCAAAATCACCCACACCGACCTGGAACGCGAAGGCGTGATGATTCATCTGGCGCGCACGAAAATCCTGGCCGGCATGTTTGACGCAGCGCAGGCCGAGCTTAATGCCATCACCAATCCCGCCTACGCCGACCTCAAACGCCGTTTGGAGAAGAGCCTGGATTATCACAAAAACCCGCCCAAGGAAGCGGCGGACGCCGGGGCAACGACGAATTCCGTCACCGCCGACGCGGGCCAATGA
PROTEIN sequence
Length: 330
MNEMTIGLLSALLATNQPQAVSNVLQQQTGVTVNLAIDPAEKALRQVMRSDDAAMDDVNKWLHEYDALDETNKTKAASAALNDRIKARLDVVRTAYDTFLREHPDSAHGYLAYGSFLDSIGDEYDAKTQYENARQLDPKNPAVWNNLANYYGEFSPVTNAFAYYAEAIKLDPTEPVYYQNFATTVYLFRKDAREFYHLNEQQVFDKALDLYRQAMKLDPGNLVLATDYAESYYGIKPMRTNDALVAWTNALKITHTDLEREGVMIHLARTKILAGMFDAAQAELNAITNPAYADLKRRLEKSLDYHKNPPKEAADAGATTNSVTADAGQ*