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berkeley_reactor_200306_planktonic_scaffold_198771_227

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(282307..282831)

Top 3 Functional Annotations

Value Algorithm Source
Transcription regulator MerR DNA binding protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2D1_NITHN similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 146.0
  • Bit_score: 115
  • Evalue 2.80e-23
transcription regulator MerR DNA binding protein similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 146.0
  • Bit_score: 115
  • Evalue 7.80e-24
Transcription regulator MerR DNA binding protein {ECO:0000313|EMBL:ADE14790.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 146.0
  • Bit_score: 115
  • Evalue 3.90e-23

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Taxonomy

Nitrosococcus halophilus → Nitrosococcus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGTCAAATGAGCGACAATTACTCATAGGCCAACTCGCAAGGGAGGTCGGAGTGAAAGCGGACACGATTCGCTTTTATGAAAAACAAAATCTCCTGCCTAAGCCCAAGCGCACGGCAGCGGGTTACCGCGTCTATGATGAGTCCGCGCTGAAACAGTTACGCTTTATCAAACAAGCGCAGTCACTCGGTTTTTCGCTGCAAGAGATCCAACGCATTTTGAATTTGCGTGGAGAAGGGAAGACGACTTGCCGCTGCGTTCTTGGTATCGCCGAAGCGACGTTGAGCGAAACCGAGGCGAAGCTGCGAGAACTCGAGGCATTCCGCGATGGTTTGAAAAGACATGTTCAGCAATGGCGGAACAAAACACAAAATGGCGGCAAGATGGCTGCGGAATTTTGTGCTCTGATTGAATCGAGCGCGAAGCCTGCGGAGCGCGCGGCGGTTCCGCCTCGGCCGGATTTGATTGGCGGCGTGAAGCATCTACCTCTCAAGTCACCGAAGTCCGCAAGCGGCGGCCCGACGTGA
PROTEIN sequence
Length: 175
MSNERQLLIGQLAREVGVKADTIRFYEKQNLLPKPKRTAAGYRVYDESALKQLRFIKQAQSLGFSLQEIQRILNLRGEGKTTCRCVLGIAEATLSETEAKLRELEAFRDGLKRHVQQWRNKTQNGGKMAAEFCALIESSAKPAERAAVPPRPDLIGGVKHLPLKSPKSASGGPT*