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berkeley_reactor_200306_planktonic_scaffold_198771_274

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(339936..341756)

Top 3 Functional Annotations

Value Algorithm Source
Chloride channel core n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDX3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 597.0
  • Bit_score: 684
  • Evalue 8.80e-194
Chloride channel core {ECO:0000313|EMBL:EEF61864.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 597.0
  • Bit_score: 684
  • Evalue 1.20e-193
Chloride channel protein similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 562.0
  • Bit_score: 373
  • Evalue 7.20e-101

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1821
ATGAACAACGCGTTCGTGCTGCGGACGCGGAGCTTTTTCCGGCGTCACCAGCAGGCCCTGCTGCGGTGGCGCGGCAAACTCGTCTTCAAGGAGGAGGCGTTCCACCTGCTCCTGGCCGCCATCGTCGGATGCATCGGGGGCACGGTGAACCTGTTCTTTTTCTATGCCGGCGAAATGGTGCAGCGACTTTTTCTGCCGGAGGCCACCGACCCGGTGCGGGCGGCGGAGATGTTCGATCCCTGGCAGCGGCTGGCCGTGCCCTCCGTCGGCGGGCTGGTGGCGGGCCTGATTTTATACTGGGGTTACCGGCTGGTGGGGCCGCAGGGCTCCAGCGACCTGCTGGAAGTGGTGGTGGCGGGCGATGGGCGGCTGCCCTTTCGCACGGAATCCTTCAAAACGGCTTCGGCGCTGGTGAGCATTGCCACGGGCGCCTCCATCGGACGCGAAGGCGGCATCACACAATTGTCCGCGACGCTGGCGTCCAAGCTCGGCCAGCTCGCCAAGTGGCCGCCCTACCGGCTGCGACTGCTGGTCGGCTGCGGCGCGGCGGCGGGCATCGCGGCGGCCTACAACGCACCCATCGCGGGAGCGGTGTTCGCGGCGCTGATCGTGCTGGGAAATTTTTCCATGAACCTCTTCGCGCCGCTGGTCTGCGCGTCGGTGGTGTCCGCGATGGTGTCGCGCAGTTTTTTTGGGATTGAACCGTGGTATGTGGTGCCGCCGTTCCCGCCGACGGCCCCGCTGGAACTGCCGTGGTTCGTGGTGATGGGCATCCTGTGCGGCGGCGTGAGTGCGGTGTTTCTCCAGTTTCTGCGGACGGCCAAGGAGCAATACAACCGGACGAAGTTGCCGATTTATGCGCGCATGATGCTGGCCGGACTGGCAACCGGAATCATCGCGGCCATCGGTTTTCCGGGCGTGTGCGGCAACGGTTATTATGTCACCAACGCCATCCTGCACGGCCAGTTTGATGCCGGCGCGGCCGCCTTCTCGCAACTGGGCGGATTGTTTTCCGCCAAACTGCTCGCCACCGCCATCACGGTCGGCGCCGGCACGGTCGGCGGCGTGTTCACCCCGACCATGTATCTCGGCGCGGGCGCCGGGGCGTTGTTCGGGATGGTCCTGCATCATTTTGGCTGCGGATTGAGCGTGCCGACGGGCGCGTTCGCGCTGGTGGGCATGGGCGCCACGCTGTCGGGCACCACGCGTTCGCCGCTGCTGGCGATGATCATGGTGTTCGAGATTTCGCTGGATTATTCGATCATGCCGCCACTGATGCTGGGCTGCGTGGTGTCGGTGCTGGTTTCGCGGCAACTGCACAAGGAATCGGTTTACACCGAGCACATGAAATTGAAGGGCCTTTCGCTCCTGCGGGAAACGGAACAGGCCGGCGCGGCGATGGACAAAACGGTGGGCGACCTGATGCAGCCGCCGGTGCCGCCGCTGCGGGAGACCGCCACGCTCAAAAAAATCGCGGACCGTTTCCTGTCCAGTTCCAACAACTTCGTGCCCATCGTGGATGGCTGCCAGCGTTTGATCGGCGTGATCGCCCTGCACGACTTGAAAGATTTCCTGCACGACAGCCAGGGGCTCGCCGGCGCCGGCATCATTGCCCTGGACGTGATGCATCCGCCGCCGCGATGCCTCACTCCCGGCCAGCGACTGCTCGACGCCCTGCCGCTGGTGCTGGAGAGCGAATTGCGAAACATTCCCGTCGTGAGCACGTTGTCGGAAAACCGGCTGGTGGGTTCGTTGTCCCGCGCGCAGGTGCTGGCGGCGTTCTCGGAAGTGATCGCGCAAAAAAGCAAGCCGGCCGGTTGA
PROTEIN sequence
Length: 607
MNNAFVLRTRSFFRRHQQALLRWRGKLVFKEEAFHLLLAAIVGCIGGTVNLFFFYAGEMVQRLFLPEATDPVRAAEMFDPWQRLAVPSVGGLVAGLILYWGYRLVGPQGSSDLLEVVVAGDGRLPFRTESFKTASALVSIATGASIGREGGITQLSATLASKLGQLAKWPPYRLRLLVGCGAAAGIAAAYNAPIAGAVFAALIVLGNFSMNLFAPLVCASVVSAMVSRSFFGIEPWYVVPPFPPTAPLELPWFVVMGILCGGVSAVFLQFLRTAKEQYNRTKLPIYARMMLAGLATGIIAAIGFPGVCGNGYYVTNAILHGQFDAGAAAFSQLGGLFSAKLLATAITVGAGTVGGVFTPTMYLGAGAGALFGMVLHHFGCGLSVPTGAFALVGMGATLSGTTRSPLLAMIMVFEISLDYSIMPPLMLGCVVSVLVSRQLHKESVYTEHMKLKGLSLLRETEQAGAAMDKTVGDLMQPPVPPLRETATLKKIADRFLSSSNNFVPIVDGCQRLIGVIALHDLKDFLHDSQGLAGAGIIALDVMHPPPRCLTPGQRLLDALPLVLESELRNIPVVSTLSENRLVGSLSRAQVLAAFSEVIAQKSKPAG*