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berkeley_reactor_200306_planktonic_scaffold_198771_284

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(356195..357787)

Top 3 Functional Annotations

Value Algorithm Source
GTPase Der n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIX9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 524.0
  • Bit_score: 714
  • Evalue 4.10e-203
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 524.0
  • Bit_score: 714
  • Evalue 5.70e-203
ribosome-associated GTPase EngA similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 496.0
  • Bit_score: 382
  • Evalue 1.40e-103

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1593
ATGTCAGGACTCATCGCCATCGTCGGCCGGCCCAATGTCGGCAAATCCGCGCTGTTCAACCGCATCGTTGGCCGGCGCATTGCCATTGTGCATGATATGCCTGGCGTCACGCGCGACCGCGTCACCGCCGAGGCGGAATGGCGCGGCCACGCCTTCACGCTCGTGGACACCGGCGGCATCGGGCTGCTGCGCAACGAAAAATCAAACGACGTGATCGTGCAGGCGGCGGTCGCGCAAGTCGGCCTGGCGATTGACGCGGCCAACGTCATTCTCCTCGTCGTCAATGTGCAGGACGGCATCGTGCCGCTCGACCGCGAAGTCGCCCAGCGCCTGCGCGAAAGCGGCAAGCCCGTGCTCGTGGCCGTGAACAAGGTGGACACCTTCCGCGAAGAAAAAAACGCCGACGAATTCGCCGCGCTCGGATTTGAAAAAATTTCCCCCGTCAGCGCCATCCACGGCCTCGGCATCGAACGCCTGATGAATGCGGCCGTTGCCCATCTGCCGGAAATCCCGCGTGACACCGTCGAAGTGGCAACTGATGAAAATGAATCCGCGGCGGACAAGGACGAATCCTCAGACGCCAAATCCCAGCCGCCCGAACCGCTCAAGTTGGCCATCGTCGGCCGGCCCAACGTCGGCAAATCCTCCATCATCAACGCGCTCACGCATTCCGAACGCGTCATCGTCTCGCCCATCGCCGGCACCACGCGCGATTCCGTGGATGTGCCGTTCGAGGTGCAGACCGAAAGCGGACCGCAGAAATACATTCTCATTGATACCGCTGGCATGCGCAAAGCCCGGCACGTGGACGATTCCGTGGAATTTTTCAGCGTGCAACGCGCCAAGGATTCCATCGCCCGCAGCGACATCACCGTGCTGGTGATTGACGCCGAAATGGGCATCACCGAACAGGACAAAAAAATCGCCGACACCATCGTCGAAGAACGCCGCGCCTGCGTCATCGTCGTCAACAAATGGGATCTGTTCGCCACCGACGTCAAACAGGCACGCGAAAAGGAAATCGAAAAACGCCGCCAGAAAAAGCGCGACGAAGGCCAGTCCAAGGAACTGACCACGCTCAACGAATTCGGCGAGTGGGTGCAGAAGAAACTGTTTTTCCTGGACTACGCCCCGGTGATTTTCACCTCTGCCAAAACCAGCTTCAATTTGGACCGCCTGCTGGAAGCCGTGCGTTACATCGCCTCGCAATTGCAGCAGAAAATTCCCACGGCCATTTTGAACCGCACCATTCACGACGCCGTGGAACGCCGCCAGCCCGTCAGCGCCCAGGGCCATCGCCTGAAATTCTATTACGCCACCCAGGTGCGCCAGGCGCCGCCAACCTTCCTGCTGTTCGTGAACCGCGACGAACTGTTTTCCGATCAATACAAGAAGCATCTCGCCAACGAAATGCGCAAGGCGTTCGGTTACGAAGGTTGCCCGCTCGTCCTGGTGCCGAAGGCGCGACCGAAAACGGTTGAGCCGAAACGCAAGTTCAAGCCCGCACCCGGCAAGAAACGGAATGATGAACATCAAGGCCGCAAACGACCACGCACCGGCGGGTTTTCGCAGCGACAGAGCCGGAAGCGATAG
PROTEIN sequence
Length: 531
MSGLIAIVGRPNVGKSALFNRIVGRRIAIVHDMPGVTRDRVTAEAEWRGHAFTLVDTGGIGLLRNEKSNDVIVQAAVAQVGLAIDAANVILLVVNVQDGIVPLDREVAQRLRESGKPVLVAVNKVDTFREEKNADEFAALGFEKISPVSAIHGLGIERLMNAAVAHLPEIPRDTVEVATDENESAADKDESSDAKSQPPEPLKLAIVGRPNVGKSSIINALTHSERVIVSPIAGTTRDSVDVPFEVQTESGPQKYILIDTAGMRKARHVDDSVEFFSVQRAKDSIARSDITVLVIDAEMGITEQDKKIADTIVEERRACVIVVNKWDLFATDVKQAREKEIEKRRQKKRDEGQSKELTTLNEFGEWVQKKLFFLDYAPVIFTSAKTSFNLDRLLEAVRYIASQLQQKIPTAILNRTIHDAVERRQPVSAQGHRLKFYYATQVRQAPPTFLLFVNRDELFSDQYKKHLANEMRKAFGYEGCPLVLVPKARPKTVEPKRKFKPAPGKKRNDEHQGRKRPRTGGFSQRQSRKR*