ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_198771_293

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(371335..373869)

Top 3 Functional Annotations

Value Algorithm Source
Beta-glucosidase-related glycosidase id=4116300 bin=GWF2_Lentisphaerae_57_35 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 824.0
  • Bit_score: 703
  • Evalue 2.60e-199
glycoside hydrolase family 3 similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 829.0
  • Bit_score: 677
  • Evalue 4.30e-192
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 820.0
  • Bit_score: 717
  • Evalue 1.80e-203

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF02_62_27 → RIF2 → Bacteria

Sequences

DNA sequence
Length: 2535
ATGAAATCATTGCTGCTGATCATTCCTTTGCTGTGCTGCCTGCCGGTTTCCGGTGCGGAAATTCCCGTTTACAAACAACCTGCCGCCCCGCTGGAAAAACGGGTGGACGATTTGTTTGGCCGGCTCACGCAGGATGAAAAATTGTCCCTGCTCGGCGGCACCGGTTTCGCCACCCGCGCCCTTCCGCGGCTGGGCGTGCCCGCCATGGCCATGGCGGATGCCGGCCAGGGCGTGCGCGGAGGCGAGAAGGGCACTCTGGGCCCGGCCACCGCTTTTCCGGCCGGAGTTTTGATGGCTGCCACCTGGGACACCAATTTGCTCCGCGAAATCGGCCGGGCCATCGGCACGGAAGCCGCCAACAAAGGTTCCGGCGTCCGCATTCTGCTCGGTCCCGCTGTCAACATCCAGCGTTCCCCCCTGGGCGGACGCAACGGCGAGTATTTCACGGAAGATCCGTATCTGGACGCGCAACTGGCGGTGGCTTACATCCGCGGCCTGCAAGGCACCGGAGTTTCCGCGTGCATCAAACATTTCGTCTGCAACAACCAGGAAACGGATCGCACCGCAGTCAACGCCATCGTCGGCGAACGCGCGTTGCGGGAAATTTATCTGCCGGCATTCCAAGCGGGCGTGCAGCAGGGCGGCGTCTGGTCGGTGATGAGTTCCTACAACAAAATCAACGGCTTTCACGCCAGCGCCAATCATTATCTGCTGACGGATGTGTTGAAAAAGCAATGGGGCTTTGACGGCCTCGTCATGTCCGACTGGGGCGGCGTTCACGAAACCGCCGTCGTGCAAGCGGGCAATGATTTGGAAATGCCCACCGGCGAAAACATGAGCGTGCCGAAACTGAAAGCAGCGCTGGAAAAAGGTTCCATCACGCAGGCGGCGGTGGATGATTCGGTTCGCCGCATTTTGCGCACCATCCTCCGCGTCGGCCTGCTCGACGGCCCGCTGCACCCCGACCACAACCTGGTCAACTCACCGGCCCACGCCCAGCTCGCCTTGCAGGCGGCGGAACAGGGCATCGTGCTTCTGAAAAACCGGAACGAACTGCTTCCGCTGGACGCTACGCGGATCAAATCCATCGCCGTCATCGGTGAAGCGGCAACGCACCTTCAGTTCGATGCGCTGGGCAGTCCGGAAGTGCATCCCACCCACGTGGTCGAAATGCTGGATGGCATCAAAGCCCGGGCCGGCAATGTGAAGATAACCTACGCATCCGCCCACACCGAAGGCGAACCGCTGCCCGCCTCCGTTCTCATTTTGCCGGACGACCACAATGCCCACGGTTATCGCGCCGAATATTTTAAAAACCGCGATCTCAAAGGCGAACCGGCCTTCGTGCGAGTGGAGCAGAACATCGTTTTGCAAGACCAACATCCGCCCACCAACAACTTTCCCGCGTCCAATTTCAGCGTGCGCTGGACCACCCGGCTCACCGCGCCCCGCGACGGCAAATACATCTTCACCTTTACCGGCGACGACGGCTTCCGCATTTTTCTGGATAACAAACCGTTGATTGATCATTGGGTGGAAACCGCCGCCACGCCCGTCTCCGGTGAAGCCGAATTGCAGGCGGGCAAAACCTACGATCTGCGCATCGAGTATTTTCAGGCCGGCGGCGCTTACGAAGCGCACTTTAACTGGCAGCCGCCGCAAACCGCCCCGTTTGCCGATGCCGTCGCCGCGGCAAAGCAGGCGGACGTCGCCATCGTCGCCGTTTCCACCCGACGCCTGGAAGGCGAAGGCCATGACCGGCCTTCGATGGATTTGCCCGGTCGCCAGGCGGATTTGATCCGGGCCGTCGCCGCCGCGAACCAGCACACCATCGTGGTGCTGAACAACGGGACGCCCGTCACCATGAACGACTGGCTGCCGCACGTGCCGGCGGTGCTGGAAGCCTGGTTCCCCGGACAGGAAGGTGGCACCGCGCTCGCCGCGATTCTGTTCGGCGACGTGAATCCATCCGGTAAACTCCCCGACACATTCGCCGTCCGTCGCGATGATTACCCCGACGCTGAAAATTTCCCCGGTAAAAATCTCGAGGTGCATTACGCCGAAGGGATCTATGTCGGTTACCGGCATTTCGACCAGGCGGGCATCAAACCGCTGTTTCCCTTCGGCTACGGGTTATCCTACACGACATTCGGTTACGATCACCTGAAGCTATCGCAAACCGAACTTGGCGCGAATGGCACCGTCACCGCCAGCGTGGACATCACCAACACCGGCAAGCGCGCCGGCGCCGAGGTGGTGGAGCTTTACATTCACGACCTCCACCCCAAAATTGACAAGCCCGTGCGTGAGTTGAAAGGATTTGCCAAGGTGAGTCTCCAACCTGGCGAAACCAAAACCGTTCATTTCCAAATTTCGCCGCGGGATCTCGCTTACTTCGATGTGGCCGGAAAGCAATGGCGGGCCGACGCCGGGGAATACGCAGTGCAAATCGGCGCCTCTTCGCGCGACATCCGGCAGCAGGCCGTATTGCGACTTGCGAATGAATACACCGACAAGGTTTCGCAACCGGATTAA
PROTEIN sequence
Length: 845
MKSLLLIIPLLCCLPVSGAEIPVYKQPAAPLEKRVDDLFGRLTQDEKLSLLGGTGFATRALPRLGVPAMAMADAGQGVRGGEKGTLGPATAFPAGVLMAATWDTNLLREIGRAIGTEAANKGSGVRILLGPAVNIQRSPLGGRNGEYFTEDPYLDAQLAVAYIRGLQGTGVSACIKHFVCNNQETDRTAVNAIVGERALREIYLPAFQAGVQQGGVWSVMSSYNKINGFHASANHYLLTDVLKKQWGFDGLVMSDWGGVHETAVVQAGNDLEMPTGENMSVPKLKAALEKGSITQAAVDDSVRRILRTILRVGLLDGPLHPDHNLVNSPAHAQLALQAAEQGIVLLKNRNELLPLDATRIKSIAVIGEAATHLQFDALGSPEVHPTHVVEMLDGIKARAGNVKITYASAHTEGEPLPASVLILPDDHNAHGYRAEYFKNRDLKGEPAFVRVEQNIVLQDQHPPTNNFPASNFSVRWTTRLTAPRDGKYIFTFTGDDGFRIFLDNKPLIDHWVETAATPVSGEAELQAGKTYDLRIEYFQAGGAYEAHFNWQPPQTAPFADAVAAAKQADVAIVAVSTRRLEGEGHDRPSMDLPGRQADLIRAVAAANQHTIVVLNNGTPVTMNDWLPHVPAVLEAWFPGQEGGTALAAILFGDVNPSGKLPDTFAVRRDDYPDAENFPGKNLEVHYAEGIYVGYRHFDQAGIKPLFPFGYGLSYTTFGYDHLKLSQTELGANGTVTASVDITNTGKRAGAEVVELYIHDLHPKIDKPVRELKGFAKVSLQPGETKTVHFQISPRDLAYFDVAGKQWRADAGEYAVQIGASSRDIRQQAVLRLANEYTDKVSQPD*