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berkeley_reactor_200306_planktonic_scaffold_226867_23

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 31624..32541

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKJ1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 305.0
  • Bit_score: 342
  • Evalue 2.40e-91
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEF59661.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 305.0
  • Bit_score: 342
  • Evalue 3.40e-91
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 305.0
  • Bit_score: 259
  • Evalue 1.00e-66

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 918
ATGAATCAATTCTTGGCGACATTGCCGTTCGACCTTTACGAACTGACCCTTTTCCAACTCGTGGCGGAAAGCGGGTCGTTTACGCGGGCGGCGGAAAAGGCCGGGCTGACGCAAAGCGCGATAACGCGGCAGATTCGCGGCATGGAGGACCGGCTGGAAGTCGCGCTGTTCGAACGCACGACGCGGCGCGTTTGCCTGACCCGGGCCGGACAATTGTTGCAGGAAAAGTCCAAAACGATTTTGGATGCCTCCAATGAGTTGTTGGGTGAAGTGCAACGGATGTTGGGAAAAATGCCGCCGACGCTGCGCGTGGGGGTGGCGCGCAGCATCGGGCTGGCATATTTCCCGGGGTATTTCTTTGCATTCCAACGGCGGCATCCGGAAGTTCAATTGCAGGTGACGCACCAGACCAGCCGCGAGATTCTCGCTTCGCTGGAGGCGGGCAGTTTGGATGCCGGCCTGATCTGCCCGCCTCCACGGCTGCCTCCATCGCTCAAGGTAACCCATCGTTTCGCCGATGAATTTACCACCATCGCTCCGCCACAATTTCCGATGAAGTCCGACAGCGCGAGCCTCACCATCAAGCAGTTGAAGAAAATATTGGTCGCCCAGCGCTGGCTGTTGATGGACCGACAAGGCTTTACCGGCCGCAAATTCACCCACTGGCTGAGGAAGCAGGACTGGCCCATTGAACCGGCCATGGAGCTTGACAGTTTCGATGTGATTGTGGCGCTGGTTTCGCTTGGTTTTGGCGTCAGCATGGTGCCGCATCGCGTGCTGGCATTGTATGGCCAAAGACGTGTTGTGCGGCGCATTCCGACCCACCCGCGATTCAGCCGCGAACTGGCAGTGGTGGTCCGGCGCAATCGGGTGACGCCGGAACCATTGCGTTCCTTCGTCGAGAGCGTTTTGTTTTAG
PROTEIN sequence
Length: 306
MNQFLATLPFDLYELTLFQLVAESGSFTRAAEKAGLTQSAITRQIRGMEDRLEVALFERTTRRVCLTRAGQLLQEKSKTILDASNELLGEVQRMLGKMPPTLRVGVARSIGLAYFPGYFFAFQRRHPEVQLQVTHQTSREILASLEAGSLDAGLICPPPRLPPSLKVTHRFADEFTTIAPPQFPMKSDSASLTIKQLKKILVAQRWLLMDRQGFTGRKFTHWLRKQDWPIEPAMELDSFDVIVALVSLGFGVSMVPHRVLALYGQRRVVRRIPTHPRFSRELAVVVRRNRVTPEPLRSFVESVLF*