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berkeley_reactor_200306_planktonic_scaffold_226867_24

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 32776..33501

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, Crp/Fnr family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWR7_OPITP similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 242.0
  • Bit_score: 266
  • Evalue 2.30e-68
Crp/FNR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 242.0
  • Bit_score: 266
  • Evalue 6.50e-69
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 240.0
  • Bit_score: 271
  • Evalue 1.00e-69

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Taxonomy

RLO_Verrucomicrobia_64_8 → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 726
ATGCCGCTGAAATTGACTGAATTAAAAAACGCCGCCGTTGTTACCACCTTGCGAAGTTGTCAATTGTTCACCGGCCTCCCGCCGGCCGACCTGGAAAAAGTGGCTGCCGTCAGCGTCATCAAATCCCTGGACAAAGGCGAATATCTCTTCCGCGAAGGCGAACCGTCGCCGGGATTTTACGTGGTGCAAAGCGGCGCGGTAAATGTTCATCGGGTCAACGCGCTGGGCAAGGAACAGGTGATTCACGTGTTTCGCGGCGGCGATTCGTTTGCCGAGGCCACCCTGGCTTCGCCCAAGGGCTGTCACGCCGACGCCCGGGCCGTGCAACCCACGCAAGTGGTGTTGATCCAAAAGGACGGGATCTTGGACCTCCTCAAGCGGCAGCCCGAACTGGCGTTGCGCATGCTTGGTTCCATGAGCAATCATCTGCGGGTTTTGGTCGGCCAGCTCGAGGATCTCACGCTCAAAGACGTGGAAACGCGGCTGGCCAACTGGCTGGTGAAACGGTCCGCCGGCTTCGTTCCGGGCCGGCCGCTGACCATCGAATTGAACGTGCCCAAACGCGTTCTGGCGGCCGAGCTGGGGACCGTCGGCGAAACTTTTTCCCGAACGCTGGCCAAGTTTCGCGAACAGAAATTAATCACCGTCAAGGGCCGCACCGTCACTGTGCTCTCACTGAACCGGCTCCGGGAATTGCTCCAAAAAAATCTGGGCGAGACATCCTGA
PROTEIN sequence
Length: 242
MPLKLTELKNAAVVTTLRSCQLFTGLPPADLEKVAAVSVIKSLDKGEYLFREGEPSPGFYVVQSGAVNVHRVNALGKEQVIHVFRGGDSFAEATLASPKGCHADARAVQPTQVVLIQKDGILDLLKRQPELALRMLGSMSNHLRVLVGQLEDLTLKDVETRLANWLVKRSAGFVPGRPLTIELNVPKRVLAAELGTVGETFSRTLAKFREQKLITVKGRTVTVLSLNRLRELLQKNLGETS*