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berkeley_reactor_200306_planktonic_scaffold_226867_76

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 109895..112858

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR13_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 1000.0
  • Bit_score: 790
  • Evalue 1.90e-225
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:EEF57709.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 1000.0
  • Bit_score: 790
  • Evalue 2.60e-225
two component regulator, sensor protein similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 988.0
  • Bit_score: 484
  • Evalue 6.20e-134

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2964
ATGACCAGCGCCGGGCACCTTGGCGCACAGACGGATTTCAATGTGAAGATCTGGCAGGCGGAAGATGGTCTGCCCAACAACATTGTCCAGGCAATTGCTCAAGCCAGGGATGGGTATATTTGGGTCGGCACTCGCGAAGGGCTTGCGCGATTTGATGGCGAAAATTTTCATTTGGTGGATTTATTACCGCAAACGTCGCAGCCATCCGTGACGTGTTTATTGGGCAGTCAGGACGGCAGCGTTTGGGTGGGGACGGATTCCTCGGGAATCTTCCATTTGAAAGGCAATAAATTAACGCATTGCGATGTGCCTGGAGGTGGCGGAGACGTCAGTGTTTACGAGATTCAAGAAAGTGGAAATGGAAAAATATGGTTTGGCACGTCGCGCGGGATATTGCGGTGGGCGAATGGAAAACTCGAGCAGGAACCGGATTTCAAAAATTCGCAACCACGGTTTTGCCCGGATAATCGTGGCGACCTGTGGGTTTTGGATAATGGCTTAAGGCGTTTAGGGTCGAATACCGCGACCGGCTATCCTTTAAAATCAGGTTCCATCCCCAATCAGGTTCGGTCGTTGTATTGCGATAAAAATGGAGTGTTCTGGATCGGGGTTGATTTCGGCAAAGGGAACGGTTTGATCCAGTTAAAGAACGGGGTCGCACAATATTTTAAACGGGGCAATGGCCCGGCGGGAATCGTCAGCACGGTTTTTCGAGACAGCATGGGTGACATCTGGGTTGGCTCTTATGCGGGATTGAGCAGATTTAAAAACGGAAAGTTCGTGAATTTTCGTGCCCCGGATGAGCCGTCGTATCGGATCTATTCCATGATCGAAGACCGGGAACATGATTTATGGATTGGCTCCGAGGAGGGGCTGGCGCGCTTGACGCGCAAGCGGTTCAAAACCATCACGAAACGTGATGGTTTGTCCCTGAATACCGTGGTGTCCATTTGCCCATGCCACGATGGCGGGGTATGGATTAGCTCCTGGGGAGGCGGCGTTAATCATTATCTCAATGGCACGATCACGCATCTGCGTTCGACGGACGGTTTAAAAACCGACTACATCCTGGCGATGACGGAAACGACGGATAGCAATCTTTGGCTGGGAGCTGATTACGGCGGGCCGCTGCAGCGGATACATCACGGACAGGTTACGGCTTACGGTCCAGCTCAAGGTTTTAATGTTGCGGCCACCAGTGCCACCATTGTTTTGCATGAGAGTCCCGACGGGGTGCTGTGGATCGGAAACCGGGATGGATTGCAAAAATGGAATGGAACCAATTTTAGCCGGTTCACGACCAAGGATGGATTGTGCAATGACAATATAAATGCGATTTGTGATGGAGTGGCTGGTGACGTTTGGTTGGGAACGGTGGGGGGCCTGACTCTGTGGAGAGAGGGGAAACTTTGCAACCTGGCCGCGCGTGATCCGCGCTTGCGTGTCTGCATCCTGTCGCTTTATTTCGACGCTCAAAATACCCTCTGGATCGGGACCAAGAATCGCGGGCTGTTGATGATGCGCGGCGGAGTTGTCAGACAGCTCGATACAAAGGAAGGGCTTTTCAGCGATTCCATCTATGCGATTTTGGGGGATAACTACACGAATTTGTGGCTCAACAGCAGTCGCGGTATTTTTCGGGTGAACAAGCTGCAGGCCGAAGCGGTGGCAGAAGGAAAAGAACCCGCGATAACCGCCATCAGTTATGGGAAATCGGATGGCATTCTGGCCAGCGGGCAGTTCAGCAATGTAACCCAACCGGCGGGTTGCAAAGACCTTGAAGGCCGGCTTTGGTTTAGAACCACCCAGGGTGCGGTGGTGGTGGATCCGAGCGTGATAGCGGTCAGCCATCAGCCGCCGCCGGTGGTGATCCAAAAAATCATTGCGGATGATAGCTCCATTACCTTTGGAATGACCGGCTCCGATATTCCTAAGCGGGTAAGAATTCCGCCGGGCCGGGGAGAATTGGAGATTCAATACGCCGCATTGAGTTATACCGATCCAGACAAAAATGTTTACAAGTATAAGTTGGACGGAGTGAATGCTGAATGGGTAAACGTCGGGAACATTCGGGTGGCCAAATATTATAATTTGCATCCCGGGAAATATCGGTTCCAAATTACCGCTTGCAATAATGACGGCATTTGGAATCCGGAAGGGCGGTCTGTGGAACTAATATTAGAACCGCACTTCTGGCAAACGTGGTGGTTTCTTTCCCTTTGCATCCTGGCTGCCGTTGGCGCCGTGAGCGGCGTGGCTCGCTTCGTCACGCGTTACAAAATGCAAAAAAAACTCACGCAATTGGAGCAACAAAGGGCGGTGGAACGGGAACGGGCGCGCATCGCCCGGGATGTGCATGACGAATTGGGTGCCCGGTTGACGCGTATTTCCTATCAAGGTGGCATTGCCAAATTATCCCTGAAAGATGCAGCGGGAATCGAACAGCACATTGACCAAATGTCCGCTGCGGCGCGGGAAGCCGTCTCATCATTGCATGAAATCATCTGGGCGGCAGATCCGCAAAACGACTCGCTGGAAGGGTTGCTGGGTCATATCGGCCATTATGCAGAAGAATTTTTCAACGCCTGCGGGATTCGCAGCGAAGTTATCACGCCAAAATTTATTCCGGGGCACCATATTTCAGCGCGCGTGCGGCACGATTTGTTCCTGGCGGTAAAGGAAGCCATGAATAACGCGGCAAAACACGCGAATCCCGGCCGGGTTTTGATCCAAATCGAAATCCGGGCCAAGGAATTTGAAATTGTGGTCACCGATGACGGTTGCGGGTTTGACCAGGATTGGACTGGCGAAGGGCCGGGCAAGGCGAGCCATTCTGGTTACCACGGTTTGTCAAACATGCACGAACGCTTGCGGAATATTCACGGAACATGTGCGGTTGAAAGCTGGAAAGGCCGGGGTACCGTGGTGCGTTTTACCATTCCGCTGCATGAGGAACTGAGCTAG
PROTEIN sequence
Length: 988
MTSAGHLGAQTDFNVKIWQAEDGLPNNIVQAIAQARDGYIWVGTREGLARFDGENFHLVDLLPQTSQPSVTCLLGSQDGSVWVGTDSSGIFHLKGNKLTHCDVPGGGGDVSVYEIQESGNGKIWFGTSRGILRWANGKLEQEPDFKNSQPRFCPDNRGDLWVLDNGLRRLGSNTATGYPLKSGSIPNQVRSLYCDKNGVFWIGVDFGKGNGLIQLKNGVAQYFKRGNGPAGIVSTVFRDSMGDIWVGSYAGLSRFKNGKFVNFRAPDEPSYRIYSMIEDREHDLWIGSEEGLARLTRKRFKTITKRDGLSLNTVVSICPCHDGGVWISSWGGGVNHYLNGTITHLRSTDGLKTDYILAMTETTDSNLWLGADYGGPLQRIHHGQVTAYGPAQGFNVAATSATIVLHESPDGVLWIGNRDGLQKWNGTNFSRFTTKDGLCNDNINAICDGVAGDVWLGTVGGLTLWREGKLCNLAARDPRLRVCILSLYFDAQNTLWIGTKNRGLLMMRGGVVRQLDTKEGLFSDSIYAILGDNYTNLWLNSSRGIFRVNKLQAEAVAEGKEPAITAISYGKSDGILASGQFSNVTQPAGCKDLEGRLWFRTTQGAVVVDPSVIAVSHQPPPVVIQKIIADDSSITFGMTGSDIPKRVRIPPGRGELEIQYAALSYTDPDKNVYKYKLDGVNAEWVNVGNIRVAKYYNLHPGKYRFQITACNNDGIWNPEGRSVELILEPHFWQTWWFLSLCILAAVGAVSGVARFVTRYKMQKKLTQLEQQRAVERERARIARDVHDELGARLTRISYQGGIAKLSLKDAAGIEQHIDQMSAAAREAVSSLHEIIWAADPQNDSLEGLLGHIGHYAEEFFNACGIRSEVITPKFIPGHHISARVRHDLFLAVKEAMNNAAKHANPGRVLIQIEIRAKEFEIVVTDDGCGFDQDWTGEGPGKASHSGYHGLSNMHERLRNIHGTCAVESWKGRGTVVRFTIPLHEELS*