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berkeley_reactor_200306_planktonic_scaffold_226867_84

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(125502..126134)

Top 3 Functional Annotations

Value Algorithm Source
Redox-sensing transcriptional repressor Rex n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR59_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 210.0
  • Bit_score: 318
  • Evalue 4.40e-84
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 210.0
  • Bit_score: 318
  • Evalue 6.20e-84
REX family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 202.0
  • Bit_score: 189
  • Evalue 5.10e-46

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 633
GTGAAAAAAACCGGCAAACCCGTCATTCCCCGTAAGACCATTTACCGGCTTTCGATTTACCTGCGCTGTCTGGCGCGGTTGCGGGAGAACGGCATTGAAACAGTTTCCAGCGAGGCGCTCGCGAAGGCGGCCGGCGTAAAGCCGACGCAATTGCGCAAGGACCTGGCGTATTTCGGCACCTTTGGCACGCGCGGCCTGGGTTATGATGTCTCGGAGTTGTCGCGCCAGATTGCCGGGGAACTCGGCACCTCCAGCCTGCAACCCGTGATTCTCGTGGGCGTCGGCAACCTCGGCCTGGCCCTGCTCTCCTATCGCGGTTTTGAAAAGGAAGGTTTTGAAATCGTGGCCGCCTTCGACACCGCGCCCAAACGCCGGCGCGACAAGGAAATCAAGCAGCCCATTCTGGAGATGAGTCAACTGGACGACTTCATCCGCGAACACGGCGTCAAGATGGCGATTCTCTCCGTCCCCGCCGCCGCCGCTCAAACGGTGGCTAACCAACTGATTGACGCGGGCATCATGGGCATCCTGAATTTTTCCCCGATTGTGCTCGCCGTGCCGGAGGATGTGATCGTCAACAACGTTAACCTCGCCATTGAGTTGGAAAACCTGAGTTACTTCATCCAGGGCTGA
PROTEIN sequence
Length: 211
VKKTGKPVIPRKTIYRLSIYLRCLARLRENGIETVSSEALAKAAGVKPTQLRKDLAYFGTFGTRGLGYDVSELSRQIAGELGTSSLQPVILVGVGNLGLALLSYRGFEKEGFEIVAAFDTAPKRRRDKEIKQPILEMSQLDDFIREHGVKMAILSVPAAAAQTVANQLIDAGIMGILNFSPIVLAVPEDVIVNNVNLAIELENLSYFIQG*