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berkeley_reactor_200306_planktonic_scaffold_226867_89

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 135033..136439

Top 3 Functional Annotations

Value Algorithm Source
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Tannerella sp. CAG:118 RepID=R5IA09_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 458.0
  • Bit_score: 626
  • Evalue 1.70e-176
Cation transporter {ECO:0000313|EMBL:KHM48603.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 458.0
  • Bit_score: 626
  • Evalue 2.40e-176
sugar (glycoside-Pentoside-Hexuronide) transporter similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 459.0
  • Bit_score: 603
  • Evalue 3.30e-170

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Taxonomy

Coprobacter sp. 177 → Coprobacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1407
ATGAAACTCCGGCTGCGCGAAAAAATCGGCTACGGCTTCGGCGACGCCGCCTCGTCCATGTTCTGGAAACTGTTCTCGATGTATTTGATGTTCTTTTACACGGACATCTTCGGCCTCCCGGCGGCGGCGGTGGGAACGATGTTCCTGGTCACGCGGATCTGGGACGCCGCCTTTGATCCCTTCGTCGGCGTGCTGGGCGACCGCACGGAAACGCGCTGGGGAAAATTCCGGCCCTATCTGCTCTGGATTTCGATTCCGTTTGCCCTCATCGGCGTGCTCACCTTTACCACGCCGGCGCTGGGGCCGGGCGGCAAACTGGCGTATGCCTATGTCACCTATTCCCTGATGATGATGATCTATTCTCTCATCAACGTGCCCTACGCCTCGCTGCTGGGCGTGATGTCGGCGGATGGCAGGGAGCGCACCACGCTGGCGACGTTCCGGTTCATCCTCGCCTTCGCCGGCAGCCTGGTCGTGCTGGCGGCGGCGGAACCGCTGGCGGGCAGGTTCAGCCGGCTTGGCGGCGACGTCAATTTGCAACGCGGCTGGCAGTGGACCGCCGCCGTGTTCGCCGGGCTGGCGATGGTGCTTTTCTGGCTCACGTTCGCCTGGACGCGCGAACGCATCCGGCCGGTGAATGAAAAAATGTCGCTGAAACACGACCTCACCGATCTGCTTCAAAACAAACCGTGGTTCATTCTGCTCGGCGCCGGGGTGGCCACGATTTTTTTCAATTCCATCCGCGACGGCGCGGCGATTTACTATTTCAAATACTACCTGCACACACGGGACGTGTTTTCGCTGCCGTCGCTGAAGCTCACCATCGGGTGGAGCAGTTTGTATTTTGTGCTCGGCCAGGCCGCAAATATCGTGGGCGTCATCCTCGCCAAGCCCGTCTCGGACCGGATTGGGAAGAAGAACACGTTTTTCCTCGCCATGATCGCGGCGACCGTTTTCAGCTTTCTGGTTTACGGCCTCTCGCCCGAGTCGGTGAAAATGGTGCTGGTCCTGCAATGTCTGATCAGCGTCAGCGCCGGCTTCGTGTTTCCGCTGCTGTGGTCCATGTATGCGGACGCGGCGGATTATTCCGAATGGAAAAATGGGCGCCGCGCCACTGGCCTGGTTTTCTCCGCGTCCTCCATGTCGCAGAAATTCGGCTGGACCCTCGGCGGCGCGTTCGCCGGCTGGCTGCTGGGTTATTACGGTTTCCACGCCAACGTCGCGCAGAATGCCGGCACCGAAACGGGTATCCGCATGATGGTCAGCGTTTATCCGGCCATCGGCGCGCTGGTGTCGGCGGCCTGCATGTTGATTTATCCGTTGCAGGAAAAATTCCTGGCGGCAATTGAAACCGACCTCGCGGCGCGACGTGAGGCCGGAGCGCGCGCCGCTTCCTCCCACGGTTGA
PROTEIN sequence
Length: 469
MKLRLREKIGYGFGDAASSMFWKLFSMYLMFFYTDIFGLPAAAVGTMFLVTRIWDAAFDPFVGVLGDRTETRWGKFRPYLLWISIPFALIGVLTFTTPALGPGGKLAYAYVTYSLMMMIYSLINVPYASLLGVMSADGRERTTLATFRFILAFAGSLVVLAAAEPLAGRFSRLGGDVNLQRGWQWTAAVFAGLAMVLFWLTFAWTRERIRPVNEKMSLKHDLTDLLQNKPWFILLGAGVATIFFNSIRDGAAIYYFKYYLHTRDVFSLPSLKLTIGWSSLYFVLGQAANIVGVILAKPVSDRIGKKNTFFLAMIAATVFSFLVYGLSPESVKMVLVLQCLISVSAGFVFPLLWSMYADAADYSEWKNGRRATGLVFSASSMSQKFGWTLGGAFAGWLLGYYGFHANVAQNAGTETGIRMMVSVYPAIGALVSAACMLIYPLQEKFLAAIETDLAARREAGARAASSHG*