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berkeley_reactor_200306_planktonic_scaffold_220752_74

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(90238..90678)

Top 3 Functional Annotations

Value Algorithm Source
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 144.0
  • Bit_score: 222
  • Evalue 3.20e-55
3-dehydroquinate dehydratase (EC:4.2.1.10) similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 139.0
  • Bit_score: 184
  • Evalue 1.50e-44
3-dehydroquinate dehydratase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBX5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 144.0
  • Bit_score: 222
  • Evalue 2.30e-55

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 441
ATGAAAATTCTGTTTCTCAATGGCCCCAACTTGAACCTGCTTGGCACGCGGGAACCGGAGGTATATGGGCGCACAACCTTGGCGGACATTGAGACGGAAGTTCGCCGGCGGGCAGCCGAACTCAAAGTGGACGTCGATTTTCGGCAGTCCAACTTGGAGGGTGATTTGGTGAACTGGATCCAAGGTGCCAAGAATACATTCCAAGTCATTGTCATCAACGCCGCCGCCTACACGCACACTAGTGTCGCACTGCGCGACGCAATTTCCGCCGTGGGCGTTCCCACCATCGAAATTCATCTTTCAAACATTCATGCACGGGAAGAATTCCGCCACAAATCCCTCATCGCTGCCGTGTGTGTCGGGCAAATCTGCGGCTTCGGCGCAAAATCCTATCTCCTTGGACTGGAAGCGTCCGTTTACGTTAACGCAACGAATAAGTAG
PROTEIN sequence
Length: 147
MKILFLNGPNLNLLGTREPEVYGRTTLADIETEVRRRAAELKVDVDFRQSNLEGDLVNWIQGAKNTFQVIVINAAAYTHTSVALRDAISAVGVPTIEIHLSNIHAREEFRHKSLIAAVCVGQICGFGAKSYLLGLEASVYVNATNK*