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berkeley_reactor_200306_planktonic_scaffold_220752_75

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(90702..92078)

Top 3 Functional Annotations

Value Algorithm Source
O-antigen polymerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBX6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 258.0
  • Bit_score: 229
  • Evalue 3.50e-57
O-antigen polymerase {ECO:0000313|EMBL:EEF62444.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 258.0
  • Bit_score: 229
  • Evalue 4.80e-57

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1377
ATGAAAACGCTTTCCGCGACGAAGGTTTACGCGCTCGCGTTCGGTCTTTTCCTCGGGCTTTGCATCTGGAAATTTGGCAACCCGGTTATCCTCGATCACAAAATCTTTCCGCCGAAGTCGCCGACGGAATTCCTAAATGAACCGTGGCCGCTGCACTGGGCGAATTGGCTGCTGTTGCCGCTGGTTTTCGGAGGGGTTCTGCTGGTGATTCAAGGCAACATTTCCTGGCCCGCCGGCCGGTGGCTGTGGGTGCTTCCCTGTCTTTGGCTGGGCTGGCAACTGGTTGCCGCCAGCCGCACGGTTGACACCAGTCTGACCAACGCCACGTTGTGGCAGTTTTGCGGTTGTCTGGCTTGCTATTTTCTCGGGGCCATGGTTTTTGCCCGCCAGCAGCTTTGGCGCTGGCTGTTGCCGGGCATTTTAGCCGCCTTTGCCTTTTGCCTAGTGCGCGGCGTGGATCAACATTTTTTCGAATATCCCCAAGCCCAAAAAATGCTGGTGGAAGGACAACGTGACGGCTGGACCAATTTTCCGCCGGAAACCATCGCCCAGATGAAGGTGGATAGCATCATCGTCACAACCAACGGACAGGACGTCGCCAATCCCGCGGTGCTCAAGCGGTTTCAAAACGGACGCGTGGCCGGAACGATGGTTTATCCCAACGCTCTCGCTGGCATCATTCTGCTGCTCTGGCCGGTTTCACTGGCGCTGGCGTTAGATGGCACCAAAAAATTAAGACCGCTGGTTCGCCTGGCGGCGATTGGATTGACCGTTTTTTTGGGCGCGGCGGCTTTTTATTGGTCCGGCTCGAAATTGGGCTGGCTGATTGCCTTGGGAATCGTCGGACTCTACCTGCTGCGGCTCGAATGGTCCAAAAAACTCAAGCTGATGGTGGTTGGACTGGTGATGATCGCCGGATTGGCAGTTTTTGCCGTGCGCTTTCAGCACTATTTTGCCCGGGGAGCCACCAGTGTCGTGGCGAGGTTTGATTATTGGCAGGCGGCGGTGCGAACCACCGCCGCTCATCCCATCGTCGGCACCGGTCCGGGAACTTTTCAACATCCCTATGAACGCATCAAGTCGCCCACTGCGGAAATGGCCCGCTTAACTCACAACGATTATTTGGAACAGTTCTCGGACTCCGGCGTGCCGGGCGGATTGGCTTATGCGGCTTGGATTGCTACGGCATTGATGCTCGCCAGGAAAAAAATTTGGCGCCGCCGCGATTTCTTGCTGACAGCAATGATGGCCGGCGTCTTGGGCTGGTTCCTTCAAGGCTTGGGTGAATTCAGTTTGTATATTCCCGCGTTGGCTTGGACAGCTTTTACGTTATTGGGGATTCAAATTGGACAAAATGCGAATGAATTAGACATATAG
PROTEIN sequence
Length: 459
MKTLSATKVYALAFGLFLGLCIWKFGNPVILDHKIFPPKSPTEFLNEPWPLHWANWLLLPLVFGGVLLVIQGNISWPAGRWLWVLPCLWLGWQLVAASRTVDTSLTNATLWQFCGCLACYFLGAMVFARQQLWRWLLPGILAAFAFCLVRGVDQHFFEYPQAQKMLVEGQRDGWTNFPPETIAQMKVDSIIVTTNGQDVANPAVLKRFQNGRVAGTMVYPNALAGIILLLWPVSLALALDGTKKLRPLVRLAAIGLTVFLGAAAFYWSGSKLGWLIALGIVGLYLLRLEWSKKLKLMVVGLVMIAGLAVFAVRFQHYFARGATSVVARFDYWQAAVRTTAAHPIVGTGPGTFQHPYERIKSPTAEMARLTHNDYLEQFSDSGVPGGLAYAAWIATALMLARKKIWRRRDFLLTAMMAGVLGWFLQGLGEFSLYIPALAWTAFTLLGIQIGQNANELDI*