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berkeley_reactor_200306_planktonic_scaffold_208745_3

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(1462..2544)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AB-629-E09 RepID=UPI0003700548 similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 365.0
  • Bit_score: 312
  • Evalue 3.20e-82
type III secretion protein similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 356.0
  • Bit_score: 268
  • Evalue 2.50e-69
Type III secretion protein {ECO:0000313|EMBL:AHF92956.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 356.0
  • Bit_score: 268
  • Evalue 1.30e-68

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Taxonomy

Opitutaceae bacterium TAV5 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1083
ATGAGCGAGCACACCGGTGAGAAAACCGAGCAACCGACGCAGCGCCGGCTGGAGGACGCGGTGAAACGCGGCCAGATTCCGCGCAGCGCCGAAGTGCAGACCGTGTTTGTGCTGTTCGGCGCGTTGGGCGCGCTGACGTTTGCCGGCCGCGAAATCTGGCAGCAATTCACCAACACCACCGCCTACGCGCTCGGGCACCTGAACAACACCCCAATCAGCGTGGCGTCGTTGCAAGGCTACGGCGTGGCGGGCGTTTTGTTTTTGCTGAAATGTGCCGGGCCGGTGCTGATCGGCACGGCGCTGGGCGGCTTGGTTGCCGGCGCCATTCAAAATCGTTTTCAAACGGCGCCCGAAGCGTTGTCGCCCAACTGGAACCGGCTCAATCCCGTGGAAGGCTTTAAACGGGTGTTTTCCGGCCGGTCGGCCGTGCCCACGCTCATCGCAGTTGGCAAGCTGATCCTGATCCTCCTGCTGACGTGGTCGGTCATTCGCAGCATTTTAAGCGACCCCATTTTTTCGACCTCGGTCAATGTCAGCCGCCTCGCGGAGTTCATGGCCACGACCACGCTGCGCATTGTCTGGCGGGTGGGCCTGGTATTGCTGGTGATTGCCGCCGTGGATTACGGCTACCAATTCTGGCGGAACCAGCGCGATTTGATGATGACCAAGGAGGAATTGAAGGAGGAAATGAAAAGCACGGAGGGCAATCCGCAGATCAAATCCGCGCGCCGGCGACGCCGGGCCGTCAGCCAGGCCAAGGCGCTGGCCGCCGTGCCGCAGGCCGATGTCATCGTCACCAATCCCACCCACATCGCCATCGCCCTGCGCTACGACCGCAAGACCATGCGCGCGCCCAAAATCATCGCCAAAGGCATTCGCCTGAATGCCTTGAAAATCCGCGAAATCGCCCAACAACATCAGGTGCCCATCATGGAAAACAAACCGCTGGCGCGGATGCTGTTCAAACACGGGAAAGTCGGCGGCGAAATCCCCGCCCAACTGTATGCCGCCGTCGCGGAAGTGCTCGCCTGGGTTTACAAGGCCAACCGGTATCGCTATTACGCCGAGCAGAACCAGGTGTGA
PROTEIN sequence
Length: 361
MSEHTGEKTEQPTQRRLEDAVKRGQIPRSAEVQTVFVLFGALGALTFAGREIWQQFTNTTAYALGHLNNTPISVASLQGYGVAGVLFLLKCAGPVLIGTALGGLVAGAIQNRFQTAPEALSPNWNRLNPVEGFKRVFSGRSAVPTLIAVGKLILILLLTWSVIRSILSDPIFSTSVNVSRLAEFMATTTLRIVWRVGLVLLVIAAVDYGYQFWRNQRDLMMTKEELKEEMKSTEGNPQIKSARRRRRAVSQAKALAAVPQADVIVTNPTHIAIALRYDRKTMRAPKIIAKGIRLNALKIREIAQQHQVPIMENKPLARMLFKHGKVGGEIPAQLYAAVAEVLAWVYKANRYRYYAEQNQV*