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berkeley_reactor_200306_planktonic_scaffold_208745_4

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(2649..3416)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AB-629-E09 RepID=UPI000371C475 similarity UNIREF
DB: UNIREF100
  • Identity: 42.7
  • Coverage: 248.0
  • Bit_score: 210
  • Evalue 1.60e-51
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.7
  • Coverage: 251.0
  • Bit_score: 149
  • Evalue 3.50e-33
flagellar biosynthetic protein FliR similarity KEGG
DB: KEGG
  • Identity: 31.3
  • Coverage: 249.0
  • Bit_score: 144
  • Evalue 2.30e-32

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Taxonomy

uncultured Desulfobacterium sp. → Desulfobacterium → Desulfobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
GTGCAAATTGACATCTACAACTGGCTGCTCGTGTTTTTGCGGATCGGCGCCTTTCTCATGGTGCTGCCGTTCTTCTCGGTCACCAATTTCCCCGTGACCCTGCGGGTGGCCGTGGGCGCGGTGGGAGCGCTGCTGCTGGCGCCGCTGCTGCCGCCATTCGCGGCGGGGCAACTGGATTTTCCGGGACTGCTGGGCGTGATGCTCCAGGAGGTTTGCATCGGACTAGTGCTGGGGTTTTTCGCCCGGATGATTTTTTACGCGCTGGACATTGCCGGCGGCGTCATCGCGACGGAGATGGGATTGAACATGGCGTCGGTGCTGGATCCCGCCGACGGCTCCGGCTCGCCGGTCCCGGGAACCATTCTGTTTTATCTCGCCACCATGGTGATGCTGACGCTGAACCTGCATCAATGGATTCTGCTGGGATTTGAACGCACCTACACCGTGCTGCCGATGGGGAGCGCCCACCTGAACAGCGCGCTGTTTGAAACCATCGTGGCCCAGTCCAGTCACCTTTTCGTGGTGGCGGTGCAGATCGCGGCCCCGGTCATCGCGGTTTCATTCGTCATCCTGCTGGTCTTTTCCGTGCTGGGCCGCGCCGTGCCGCAGATGAACGTTTTTTCGGAAAGCTTTTCGTTCCGCGTGGTCGGCGGGCTGATCGTGTTCGGGTTCACGCTGCAACTGGCCGCGCAGCACGTCGCGAACTATCTGAACCGGCTGCCGGACGATTTGCTGGCCGTGGCCCAAATGCTGGGAGGTCAAAGTTGA
PROTEIN sequence
Length: 256
VQIDIYNWLLVFLRIGAFLMVLPFFSVTNFPVTLRVAVGAVGALLLAPLLPPFAAGQLDFPGLLGVMLQEVCIGLVLGFFARMIFYALDIAGGVIATEMGLNMASVLDPADGSGSPVPGTILFYLATMVMLTLNLHQWILLGFERTYTVLPMGSAHLNSALFETIVAQSSHLFVVAVQIAAPVIAVSFVILLVFSVLGRAVPQMNVFSESFSFRVVGGLIVFGFTLQLAAQHVANYLNRLPDDLLAVAQMLGGQS*