ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_208745_62

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 73033..76107

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AH82_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 1020.0
  • Bit_score: 1320
  • Evalue 0.0
type I restriction endonuclease, HsdR family similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 1044.0
  • Bit_score: 1312
  • Evalue 0.0
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 1025.0
  • Bit_score: 1359
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF02_62_27 → RIF2 → Bacteria

Sequences

DNA sequence
Length: 3075
ATGGCTAAAATTATTGAATCAGTGGTGGAACAAGCCGCGCTGGACTGGCTCGGCGGGCTGGGCTACGAAATTGTATCGGGCGTGGATATTGCACCGGGTGAACCAGCAGCGGAACGCACGGATTACAAACAGGTTTTTCTGCCCGACCGGGTGGAAACCAAGCTGGAGGATTTGAATCCGCAAATTCCGGCGGAAGGCATTGCCGAGGCGATCAGAAAACTACGGCTGGTCAGCCATCCCACGCTGGTCGAAAACAACCGTGCCTTTCACAAATTGCTGGTGGAAGGCGTGGACGTGGAGTTTCGGAACCAGGCGGGGGAAATCGTCCATGACAAGGTCTGGCTGATTGATTTCGCCAATCCCGAAGCCAACGAATTCCTGGCGGTGAATCAGTTCACGGTCGAAGAAGGCCATTTCAACCGGCGTGCGGACGTGGTGGTGTTCCTCAACGGCATTCCGCTGGCGGTGATGGAGCTGAAAAACATCGCGGATGAACAGGCCACCATCCGCAAGGCGTTCGACCAGTTCCAGACTTACAAGGCGCAAATCCCGGCGCTGTTTCATTCCAACGCGCTGCTGGTGATTTCGGATGGCATCGAAGCGCGGCTGGGCACCGTCACGTCGGATTGGGAAAGGTTCATGGCGTGGCGCACAATCACGGGTCAAGACTTGGTGCCGCCGGGGTCGTTGCAGTTGGAAACGCTGCTCAAGGGCGTGTTCGACAAACACCGCTTGTTGGACTTAATCCGGAATTTTGTGGTTTTTGAAGATGATGGCGAGAAGGTGATCAAAAAGCTGGCGGCTTATCATCAATTTCATGCCGTCAACAAGGCGGTGGCGAAAACCGTCGAAGTGTCGCGACCGGATGGTGACCGGCGGGCTGGTGTGATCTGGCACACGCAGGGCAGCGGCAAGAGTCTTTCGATGGTGTTTTACACCGGCAAGATCGTCCAGCATCCGGCGATGGAGAATCCGACCGTCGTCGTCCTTACGGATCGCAACGATTTGGACAATCAGCTTTTTGACACCTTTTCGTTTTGTTCGGAGTTGCTGCGGCAAAAGCCGGTGCAGGCGGAGAGCCGGGATCATTTGCGCGAGTTGCTGAAGGTGGCCAGCGGCGGCGTGGTGTTCACGACGATTCAAAAATTTTTCCCGGACGACAAAGCCGCCAAGCATCCGTTGCTGTCGAACCGGCCCAACATTGTCGTGATCGCCGACGAAGCGCACCGCAGCCAATACGATTTCATTGACGGTTTCGCCAAGCATATCAGGGATGCGTTGCCCAAGGCGTCGTTCATCGGCTTCACCGGCACGCCGATTGAGAGCGGCGACAAAAACACGCAAGCCGTGTTCGGCGATTACATTGATGTCTATGACATTCTCCAAGCCAAGGAAGATCACGCCACGGTGCCGATTTATTACGAGGCGCGGCTGGCGAAGATTGATTTGAAGCCGGAGGAACGTCCGAAGATTGACCCGAGTTTTGAGGAAGTCACGGAAGACACCGAAGCGGCAACCAAGGAAAGCCTGCGTCGCAAGTGGGCGCAACTGGAGGCGATGGTCGGCACGGAAAAACGAATCGGTCTGGTCGCGGAAGATTTGGTGAAGCATTGGGAGACACGTCTGGACGCGATGGACGGCAAGGCGATGGTCGTCTGTATGAGCCGCCGCATTTGCGTGGAGTTGTATGAGCAGATTCGCAAGTTGCGTCCCCACTGGCATCATGATGATGACGACAAAGGCGTGATGAAAATCGTCATGTCCGGGTCGGCGTCGGACAAGCTGGAGTGGCAGCAGCATATCCGCAACAAGCCGCGCCGCGAGGAGTTGGCGAAGAATTTCAAAAACCCAAAGCATCCGTTCAAGATTGTTATCGTGCGCGACATGTGGCTGACCGGCTTTGACGCGCCGTGTCTGCACACGATGCATGTGGACAAGCCGATGAAAGGCCACGGCTTGATGCAGGCCATTGCGCGGGTGAACCGGGTTTTCAAAGACAAACCCGGCGGACTGGTGGTGGATTATCTCGGTCTGGCGGAGGAATTGAAGCTGGCGCTGGTGGACTACACCAACAGCAAGGGTAAAGGCGAAATCAAGCTGGACCAAGAGGAAGCCGTCGCCGTGATGTTGGAGCGATATGAGCGAGTCTGCGCCATCCTGCACGGCTTTGATTATCCATCAGCGGCCGAGATGCCGCCGGGAAAACGGTTGAAGGAAATCGGACTGGCGGCCAATCATGTGCTGGAACAAAAGGACGGTAAACCAAGATATTTGCTGGCTGTCAGCGAATTGTCCAAGTCCTTCGCGTTGTCGGTGCCGCATGAGAAAGCGCTGGAGATTCGTGATGAAGTCGGGTTCTTTCAGGAAGTCCGCGCGGTGCTGGCCAAGAGCATTGAAGGGCCAAATGGCAAAAAATCACCGGAAGAATTGGACGCGGCCGTGCGGCAAATCGTGTCGCGCGCTATTGCCTCGGACAAGGTGATAGATATTTTCGACGCCGCCGGTTTGAAGAAACCGGATATTTCCATTTTGTCGGATGAATTTCTGGCGGAGGTCAAGCACCTGCCGCAGCGCAATCTGGCGGTGGAGTTGTTGCAAAAGCTGCTGAACAACGAGCTGAAGATTCGTTCCAAAAAATACTTGGTTCAATCACGTTCCTTTGCCGAGATGCTGGAAGCCACGATCCGCAAGTATCAGAACCGCACCATCGAAGCCGCACAGGTCATCGCCGAATTGATCGAACTCGCCAAGAAGATGCGCGAAGGCCATCAACGCGGCGAAAAGCTCGGGCTCAACGATGACGAAGTGGCGTTCTACGATGCGCTGGAAGTCAATGACAGCGCGGTGAAAGTGCTGGGCGAACCCACGTTGAAAGACATCGCGCGGGAATTGGTCACCCAAGTTCGCAAGAGCGTGACGATTGACTGGACGTTGCGGGAAGCCGCGCAGGCGCAAATCCGCGTGATCGTCCGCCGCATCCTCCGCAAATACGGCTACCCGCCGGACAAACAGGAAAAGGCGACGCAGACGGTTTTGGAACAGGCGAAGTTGCTTTGTGCGGAATGGGCGGAATAG
PROTEIN sequence
Length: 1025
MAKIIESVVEQAALDWLGGLGYEIVSGVDIAPGEPAAERTDYKQVFLPDRVETKLEDLNPQIPAEGIAEAIRKLRLVSHPTLVENNRAFHKLLVEGVDVEFRNQAGEIVHDKVWLIDFANPEANEFLAVNQFTVEEGHFNRRADVVVFLNGIPLAVMELKNIADEQATIRKAFDQFQTYKAQIPALFHSNALLVISDGIEARLGTVTSDWERFMAWRTITGQDLVPPGSLQLETLLKGVFDKHRLLDLIRNFVVFEDDGEKVIKKLAAYHQFHAVNKAVAKTVEVSRPDGDRRAGVIWHTQGSGKSLSMVFYTGKIVQHPAMENPTVVVLTDRNDLDNQLFDTFSFCSELLRQKPVQAESRDHLRELLKVASGGVVFTTIQKFFPDDKAAKHPLLSNRPNIVVIADEAHRSQYDFIDGFAKHIRDALPKASFIGFTGTPIESGDKNTQAVFGDYIDVYDILQAKEDHATVPIYYEARLAKIDLKPEERPKIDPSFEEVTEDTEAATKESLRRKWAQLEAMVGTEKRIGLVAEDLVKHWETRLDAMDGKAMVVCMSRRICVELYEQIRKLRPHWHHDDDDKGVMKIVMSGSASDKLEWQQHIRNKPRREELAKNFKNPKHPFKIVIVRDMWLTGFDAPCLHTMHVDKPMKGHGLMQAIARVNRVFKDKPGGLVVDYLGLAEELKLALVDYTNSKGKGEIKLDQEEAVAVMLERYERVCAILHGFDYPSAAEMPPGKRLKEIGLAANHVLEQKDGKPRYLLAVSELSKSFALSVPHEKALEIRDEVGFFQEVRAVLAKSIEGPNGKKSPEELDAAVRQIVSRAIASDKVIDIFDAAGLKKPDISILSDEFLAEVKHLPQRNLAVELLQKLLNNELKIRSKKYLVQSRSFAEMLEATIRKYQNRTIEAAQVIAELIELAKKMREGHQRGEKLGLNDDEVAFYDALEVNDSAVKVLGEPTLKDIARELVTQVRKSVTIDWTLREAAQAQIRVIVRRILRKYGYPPDKQEKATQTVLEQAKLLCAEWAE*