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berkeley_reactor_200306_planktonic_scaffold_208745_64

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(78111..80570)

Top 3 Functional Annotations

Value Algorithm Source
Arabinan endo-1,5-alpha-L-arabinosidase {ECO:0000313|EMBL:EEF60159.1}; EC=3.2.1.99 {ECO:0000313|EMBL:EEF60159.1};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 712.0
  • Bit_score: 513
  • Evalue 5.10e-142
Arabinan endo-1,5-alpha-L-arabinosidase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIT2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 712.0
  • Bit_score: 513
  • Evalue 3.70e-142
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 337.0
  • Bit_score: 307
  • Evalue 1.10e-80

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2460
ATGAATTACCGGTTCGCAGCCATTGATGCCACAGCGTTGTGCCTGGCGTGGCTGCTTCTGCTGGCCCTCACGTTGAACGGTCAGGCGCAAATGCCGGTTTATGGCGATGTCTGGGCGCACGATCCTTCCACGATGATCAAGGATGGCGACCGTTATTACATCTTCCGCACCAGTCCGGGCATCATGGGGAAATATTCCACAGACCTGCGCAACTGGACTTACAGCGGGCAGGTGTTTCCGAACGGGATTCCTCCCGCCTGGGTCACCAATGCGGTGCCCGGTTTTACGGCTGCCGATTCATTTTGGGCCCCGGACATCGCCTATTTCAATGGCCGTTACAATCTGTATTACGCCGTGTCCCGTTGGGGCACCATTGATTCAGCCATCGGACTCGTCACTTCGCCCTCGCTGACTTCGCCGGTTTGGACGGACTGCGGCAAGGTCATTCAATCCGACGCCACCTGGGAAGCGACCTCCAACACGGATCTTACGTCCTACAATTGCATTGACCCCAGCATCCTGGTGGATACCAACGGAACGGTCTGGATGTCGTTCGGTTCCTACTCCGACGGCATTCTGGTCATGCAACTGGATCCGGCCACCGGAAAACGCATCGCCCCCAACTCACCCGTTTACCGGGTCGCCAACAACGGGCCCGTGTTTTTCAGCAACACCGAGGAAGCCTCGTGCCTGTATCAGCATGGCGGCTATTACTATTTATTTGTGAATTTCGGCGGCTGCTGCGCGGGCATTGACAGCACTTACAACATCCGCGTGGGCCGCAGCCCCCAGGTTACCGGACCCTTTTACGACCAGAACAACGTCAGCCTGCTGGATGGCGGCGGCACCGTGTTGCTCGAAAGCACCGGCCGTTTTATCGGCCCCGGCCACGCGGCCATCATGAACGACAACGGCACCAACTGGTTCACGTATCATTATTACGACGGCAACGACAACGGCACGGCGAAACTGGGATTGAACCGGCTCGCGTGGTCCGCCGACGGCTGGCCGGAGCTGACCAACGACTGGAGCGCGTTTTACCCGTTCACCGCGGATGCCCGCGAAAACCTGGCGACTTACAACGGCACGTTGCAAAACGGCGCGGCGATCACCAACGACCCCGATTTCGGCAGGGCGCTGCGCTTGGACGGCGTTTCGCAATACGCTTCCCTGCCCGTCTCCGTCGCCAACTGCCGCACCCTCGCCACCTGGGTGAAATGGAATGGCGGTGTTGACTGGCAGCGGATTTTTGATTTCGGCAACAGCACCTCCAGTTACTGCTTTCTGACCCCGCGAACTTCCACCGGCGTCATGCGTTTCGCCATCACCACCAATGGCAACGGCGCGGAACAGCAAATCAACGCCCCGTTCGCCCTGCCCACCAATTCATGGTGCCACGTCGCCGTCGCCCTCGACGGTTCGCAAGGCGTGCTGTATTTCGATGGAGCGCCGGTCGCCACCAACGCCAGTCTCACGATTCGTCCCTGGCAAACCATGTCCCGCAACAATAACCTCGGCAAAAGCCAGTGGCCGGCCGATCCGCTGTTTGGCGGCGAAATTAGTTCGTTTCGCATTTTCGGCCGTGCCTTGGACGCCGCAGAAATCCGGGATCTCGCCTGGGCACCGCCGGCATTGGCACATCGTTACAGTTTCAACGGCGACGCGCGGGATTCCATCGGCATGGCCAACGGCACCCTCATGGGCAACGCCAGCATCACGAACAACGCCCTCAAGCTGACCGGTGCCGCCGGCGATTATGTCAGCCTGCCCGGCGGACTGGTGTCCGGATCCTCGGCGGTGACGCTGGAATTTTGGGCGTCGTTTGGCGCGAACGGCGACTGGGCGCGCGTGGTGGATTTTGGCAACATGGCGGGCGACAGCGGTTCGCAATATTTTTTCTTCAGCCCGCACACCTCCCTCGGCGGACAACGAATGGAATTGAGCGGCAACACGACCACGACGTTTGATCCGGCCGGCACGTTCGACCACCGCACCCTGCACGTGGCCTGCATCGTGGATCCCACCAATCATTACGCCGCCGTTTACACGAACGGCGTGCTGGAACAATCCCTGGCCGCTTCCTGGCCGGCGTTCAGTTCGGTCAGCACCGCCTGGTCGTTCATCGGCCGTTCCCTGTTCCAATCGGACGCCTGGCTGAACGGCACGATTGATGAATTGCGGCTTTACGACGGACGGCTCACGCCGCAACAAATCGCTGTCAATGACGAGTTCGGTCCCGACGCGCTCGCCCTGCCCGTCTCGCTGGAGCGTTCCAACGCGGTTTCCCAACTGACGTTTTCCTGGCCGTCCTGGGCTGTGGGATTCACGTTGGAATCGTCAACAAATCTTCACGCCGGCCTATGGATTCCAGTGCCGCAGCCGCCCCAGCTTGCGGACGACCGCTGGTCGGCAACGGTTCCCAAATCAACCGTCTCGACATTTTATCGCCTGCGAAGATAA
PROTEIN sequence
Length: 820
MNYRFAAIDATALCLAWLLLLALTLNGQAQMPVYGDVWAHDPSTMIKDGDRYYIFRTSPGIMGKYSTDLRNWTYSGQVFPNGIPPAWVTNAVPGFTAADSFWAPDIAYFNGRYNLYYAVSRWGTIDSAIGLVTSPSLTSPVWTDCGKVIQSDATWEATSNTDLTSYNCIDPSILVDTNGTVWMSFGSYSDGILVMQLDPATGKRIAPNSPVYRVANNGPVFFSNTEEASCLYQHGGYYYLFVNFGGCCAGIDSTYNIRVGRSPQVTGPFYDQNNVSLLDGGGTVLLESTGRFIGPGHAAIMNDNGTNWFTYHYYDGNDNGTAKLGLNRLAWSADGWPELTNDWSAFYPFTADARENLATYNGTLQNGAAITNDPDFGRALRLDGVSQYASLPVSVANCRTLATWVKWNGGVDWQRIFDFGNSTSSYCFLTPRTSTGVMRFAITTNGNGAEQQINAPFALPTNSWCHVAVALDGSQGVLYFDGAPVATNASLTIRPWQTMSRNNNLGKSQWPADPLFGGEISSFRIFGRALDAAEIRDLAWAPPALAHRYSFNGDARDSIGMANGTLMGNASITNNALKLTGAAGDYVSLPGGLVSGSSAVTLEFWASFGANGDWARVVDFGNMAGDSGSQYFFFSPHTSLGGQRMELSGNTTTTFDPAGTFDHRTLHVACIVDPTNHYAAVYTNGVLEQSLAASWPAFSSVSTAWSFIGRSLFQSDAWLNGTIDELRLYDGRLTPQQIAVNDEFGPDALALPVSLERSNAVSQLTFSWPSWAVGFTLESSTNLHAGLWIPVPQPPQLADDRWSATVPKSTVSTFYRLRR*