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berkeley_reactor_200306_planktonic_scaffold_208745_66

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(82873..83619)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIT1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 240.0
  • Bit_score: 170
  • Evalue 1.80e-39
Uncharacterized protein {ECO:0000313|EMBL:EEF60158.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 240.0
  • Bit_score: 170
  • Evalue 2.50e-39
prepilin-type N-terminal cleavage/methylation domain similarity KEGG
DB: KEGG
  • Identity: 31.4
  • Coverage: 255.0
  • Bit_score: 96
  • Evalue 7.00e-18

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 747
ATGCCGCACATCAAGCGCCGTCTGCTAAACGCGTTTACCCTGATTGAACTGCTGGTGGTCATTGCCATTATCGCCATCCTGGCGGCGATGCTGTTGCCGGCGCTGGCCAGCGCCAAGGAACGGGCCCGGCGCGCGGGCTGCGAAAGCAACCTGCACCAGCAAGGTATCGCGCTGCAAATTTACACGGGCGACAATCACGACCGCTATCCCGACCTGCGTTACCCGCCCTTCACCACTACTCCGGGCACGGCGCTGGGCCTGTGGCCGTGGGATGTTTCGACCAATCTGACCGACAGTTTGATCGCCAACGGCGGCACGCGGGATATTTTCTATTGTCCTTCCGACGCGGCCTTCAATGTGACCAACACGTGGGATTTCAGCCCGGTTTTCCGCATTCTTGGTTACGTTTACCTTTTTCCCGGCGCCGGCATGAACGCCGGCGGCAAGCCCGAATCGCCCTTCTGGAAAACCAACTCGGTCGGCACGCCGGCGCATCCGCCCGCCGATTCGGAAGTGGTGGTGGACGTGATTGTGCGCGACACGGGCACTGGAAGTTACAGCCGCATTTCCGTGGGCGGACTGCCGCCCACGATCATCCAGCGCACCAGCCATTTGAACGGCGCCCTGCCGGCGGGCGGCAACGAGCTGTTCGAGGACGGCCATGCGGAATGGCGCAAGTTCAGCATCATGTATAACAACGGTCACCCGGAAAAATATTTCGGCAACAACCCGGTTTTCATTTTTTAA
PROTEIN sequence
Length: 249
MPHIKRRLLNAFTLIELLVVIAIIAILAAMLLPALASAKERARRAGCESNLHQQGIALQIYTGDNHDRYPDLRYPPFTTTPGTALGLWPWDVSTNLTDSLIANGGTRDIFYCPSDAAFNVTNTWDFSPVFRILGYVYLFPGAGMNAGGKPESPFWKTNSVGTPAHPPADSEVVVDVIVRDTGTGSYSRISVGGLPPTIIQRTSHLNGALPAGGNELFEDGHAEWRKFSIMYNNGHPEKYFGNNPVFIF*