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berkeley_reactor_200306_planktonic_scaffold_208745_68

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(86295..86864)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRZ7_OPITP similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 166.0
  • Bit_score: 213
  • Evalue 1.40e-52
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 166.0
  • Bit_score: 213
  • Evalue 3.90e-53
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACB74673.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 166.0
  • Bit_score: 213
  • Evalue 1.90e-52

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Taxonomy

Opitutus terrae → Opitutus → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 570
ATGGACGCGAATCAAAATCAAACGCGCATTTTAGCCGGTGAACCGGCGGCCGCCCTGCCCCGGCCGCCGGAAGAACTTCTGCCGTTGGTTTATGAAGAATTGCGCAAGCTGGCCGCATCGCGCATGGCCCAGGAATCCTCCGGCCACACGCTGCAGGCCACCGCGCTCGTTCACGAAGCCTGGGTTCGCCTGACCGGCGGCGCCGGCCGGCAATGGGCCAACCGGGCGCATTTTTTCGCGGCGGCCTCGGAGGCGATGCGGCGCGTGCTCATCGAAAACGCCCGGCGCAAGGCGCGCGTCAAACACGGGGGCAGCCTGATGCGGACGGAGCTGGAACCGCTGGATCTCGCCGCGCCGTCAACGGACGAGATGGTGCTGCTGGTGAACGAGGCGCTGGAGCGCTTCAAAGCGGAGGATTCCGAAAAGGAAAAAATCGTGGTGATGAAATTTTTCGGCGGCTTGACCAATCAGGGGGTGGCGGAAAGCCTGGGCGTGACGGAGCGCACGGTCGAGCGGCAATGGGCTTACGCGAAAGCCTGGCTGTATCGGGAGATTCGCAATGCGGCTTGA
PROTEIN sequence
Length: 190
MDANQNQTRILAGEPAAALPRPPEELLPLVYEELRKLAASRMAQESSGHTLQATALVHEAWVRLTGGAGRQWANRAHFFAAASEAMRRVLIENARRKARVKHGGSLMRTELEPLDLAAPSTDEMVLLVNEALERFKAEDSEKEKIVVMKFFGGLTNQGVAESLGVTERTVERQWAYAKAWLYREIRNAA*