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berkeley_reactor_200306_planktonic_scaffold_228973_43

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 38400..40889

Top 3 Functional Annotations

Value Algorithm Source
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 644.0
  • Bit_score: 891
  • Evalue 9.10e-256
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20) similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 838.0
  • Bit_score: 618
  • Evalue 2.30e-174
hypothetical protein n=1 Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI00036ACDC0 similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 834.0
  • Bit_score: 937
  • Evalue 6.10e-270

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2490
ATGAAAGTCACCCTTAACTGGCTCAAACAATACGTTGATTTCAACTGGTCGCCCGAGGAACTCACCGAGCGGCTCACCATGCTCGGCCTCGAAGTCGAAGGCGTGCAGAAAATTTCCGGCGCGTTCGAAGGCATCGTTGTCGCGCAGGTCCTCACGCGCGAAAAACATCCGAACGCCGACAAGCTCTCGGTTTGCCGCGTAAACGACGGCACCGGCGAACGCCAGATCGTCTGCGGCGCGCAGAATTTCAAGGCCGGCGACAAAGTGCCGCTGATTTTGCCCGGCGCGTCGCTGCCGTTAAAGCCCGGCGAAACCGCGCCGTTCACCATCAAGGTCGGCAAGATTCGCGGCGTGGAATCGCACGGCATGCTGTGTTCGCACGAGGAACTGGGGATTGATCCCGAAACCATCGGCCACCAGAAGGAGGACGGCCTGCTGATTCTACGCGAGGACGCCAAGGTCGGCCAGCCGTTCGCCGAATATCTTGGCCTCAGCGGCGGTGATGTAGTTTATGATTTGGAAACCACGCCGAACCGTCCGGACTGGAACAGCGTCATCGGCATCGCCCGCGAAATCTCGGCGTTGACAGGCAAGCCGCTGAAGCTGCCGGAAATCAAACTCGGTGGGGCGAGCGTCCCCGCGAGCCGGGGCGAAGAGGCGGTTCGTCAGGAGCCTCGCCCCACCAGCGAATTGGTGGCCGTCCGCATCGAGGACGCTGAACTGTGTCCGCGCTACACCGCCCGCGTCATCAAGGGCGTGAAGATCGGCCCCAGCCCGGCGTGGCTGCGCGAGACGCTAGAAATGGTCGGCATTCGCAGCATCAGCAACGTCGTGGACGTGACCAACTACGTCATGCTGGAAATCGGCCAGCCGCTGCACGCGTTTGATTATCATTTGATTGCCAAAGGCGCGTCCGGCCAGCCAACCATCGTCGTCCGCCGCGCCGGCGAAGGGGAAAAATTCAAAACGCTCGACAACCAGGAGCGCACGCTCACGCATGAAATGATGTTGATCGCCGACGAGCAAAAAGGCATTGCCCTCGCCGGCGTGATGGGCGGCGCCAACACGGAAATCAACGATCAGACCGTGGACGTGCTGATCGAAAGTGCGTATTTCAAACCGACGAATATTCGACGCACCAGCAAGCAGCTTGGCCTGCGCAGCGAATCCAGCTACCGCTTCGAGCGCGGTGCCGACGTGGGCATCTGCGACTGGGCCAGCCAGCGCGCGGCGCAGTTGATTCTGGAAACTGCCGGCGGGGAACTGGCCGAAGGCGTGGTGGATGTCTATCCCAAACCCGCCGAACCCAAGCAGCTTTCTCTGCACTTTGCGCGGTCGAAAGATTTGCTCGGCATCGGCATTTCGCACGCCGAACAGGTTGGATTTCTCACCGGCCTCGGCCTGACCGTGGCCAGGCAGGAACCGGGCGAATGCACCTTCAACATTCCCACGTGGCGCGTGGATCTGAAGCGCGAGGTGGATTTGATCGAGGAAGCCGGCCGGCTCTACGGCGTGGACAAAATTCCATCAACACCGCCGCGCGGCGCGCTCGGCTCCAATGAATTTGACGCGGTTTACGATCAAATCGCCGAAGCCCGCCGCATTCTCACCGGCCTTGGCTTGAATGAAGCGCAAGGGCAAACGCTGATTTCCAAATCCGAATGTCGCCTGACGAATGACGAAACCATCGTCGCCCTCGCGAATCCGCTCAGCTCGGACATGGACGTGCTGCGGCCGAGTTTGTTGCCCGGATTAGTTCATTCGCTGCGGCACAACGTCAGCCACAAGAATTACGACGTGGCCTTGTTCGAGGTTGGCCGTGTCTTCACCAACGTGAACGGCCAGACCAAGGAACAGCGCAATGTCGCCATCGCCATCACCGGCCAGCGCGGGCTGAATTTCTGGAGCGGTGACGAGCGCGACGCGAAATTTGACGCCTACGACCTGAAAGGGTTGGTGGAAGAATTCATCGAGCAATTCGGCCTGCGCGGCGTGGCGTTTAGCAAACGGGCCGAAAGCACGGCGTTGTTCCTCGAATCCGCCGCTGTCACGCTCGGAGGAAAATTGCCGCTGGGCGAACTTGGCCAGTTGCTGCCGGCGCTCGCCAGGAAATACGATTTGCGCGACGCCGTTTTTCTCGCGGAGTTCAACCTGGATTTGCTGCTGACGAAACGCAATCCGGCCAAGTCGTTCAAGACTTTGCCGCAATTCCCAAGCAGCCGGCGCGACGTGGCGATGATTGTGCCGGAAACAGTGACCCACGAATCGGTGCTGCAAACCGTCAAGCAGGCCAAGGCCGCCAACCTCGAATCCGTTGAATTGTTCGACGTGTTCCGCGGCCAGGGCATTCCCGACGGTCAAAAGAGTTTGGCTTACGCGTTCACCTATCGCGCTGCGGACAAAACATTGACGGAAGCCGATGTGAACGCGGCTCACGAGAAGGCCGTGAATGCGCTGAAGACGCAGTTGAAGGCGGAATTGCGGGCGTAA
PROTEIN sequence
Length: 830
MKVTLNWLKQYVDFNWSPEELTERLTMLGLEVEGVQKISGAFEGIVVAQVLTREKHPNADKLSVCRVNDGTGERQIVCGAQNFKAGDKVPLILPGASLPLKPGETAPFTIKVGKIRGVESHGMLCSHEELGIDPETIGHQKEDGLLILREDAKVGQPFAEYLGLSGGDVVYDLETTPNRPDWNSVIGIAREISALTGKPLKLPEIKLGGASVPASRGEEAVRQEPRPTSELVAVRIEDAELCPRYTARVIKGVKIGPSPAWLRETLEMVGIRSISNVVDVTNYVMLEIGQPLHAFDYHLIAKGASGQPTIVVRRAGEGEKFKTLDNQERTLTHEMMLIADEQKGIALAGVMGGANTEINDQTVDVLIESAYFKPTNIRRTSKQLGLRSESSYRFERGADVGICDWASQRAAQLILETAGGELAEGVVDVYPKPAEPKQLSLHFARSKDLLGIGISHAEQVGFLTGLGLTVARQEPGECTFNIPTWRVDLKREVDLIEEAGRLYGVDKIPSTPPRGALGSNEFDAVYDQIAEARRILTGLGLNEAQGQTLISKSECRLTNDETIVALANPLSSDMDVLRPSLLPGLVHSLRHNVSHKNYDVALFEVGRVFTNVNGQTKEQRNVAIAITGQRGLNFWSGDERDAKFDAYDLKGLVEEFIEQFGLRGVAFSKRAESTALFLESAAVTLGGKLPLGELGQLLPALARKYDLRDAVFLAEFNLDLLLTKRNPAKSFKTLPQFPSSRRDVAMIVPETVTHESVLQTVKQAKAANLESVELFDVFRGQGIPDGQKSLAYAFTYRAADKTLTEADVNAAHEKAVNALKTQLKAELRA*