ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_228973_58

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(56604..57974)

Top 3 Functional Annotations

Value Algorithm Source
Xylose transporter n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A2Q8_9PLAN similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 441.0
  • Bit_score: 586
  • Evalue 1.40e-164
xylE; xylose transporter similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 445.0
  • Bit_score: 577
  • Evalue 2.50e-162
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 451.0
  • Bit_score: 637
  • Evalue 7.70e-180

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RifOxyA12_full_Lentisphaerae_48_11_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 1371
ATGAAAAAACAAATCTTCTTTTGGTCGCTGGTGTCGGCGCTGGCCGGATTTTTATTCGGCTTTGACACCGTGGTCATCTCCGGCGCGGAACAAAAAATTCAGGCGCTTTGGGGGCTCAGCGACGCCATGCAGGGATTTGCCCTGGCCTCGGCCCTTTACGGAACGGTGCTGGGCGCATTACTGGGCGGGGTGCCGACCGACCGGTTTGGGCGCAAGAAAACGCTGTTGATAATCGGTGTGTTTTACATGTTGTCGGCGATCGGCTGCGCGTTTTCCCCGGGCGTTTATTCGTTCATCGCCGCGCGCTTCATCGGTGGACTGGGTATTGGTATTTCGACCGTGGTGTCGCCGCTTTACATTTCCGAAATCGCGCCGCCGGCCTATCGCGGACGGCTGGCGGGCATGTTTCAGTTCAACATCGTGTTCGGCATTCTGGTCGCCTACGGTTCCAACTGGCTGCTCTCCGGCCTGGGCCCGGACGACTGGCGGTGGATGCTGGGCGTGGCGGCGTTTCCTTCGCTCATTTACACCGTCTGCTGTTTCGTTCTGCCCGAAAGTCCTCGCTGGTTGATCGGACGCAAAGGCGACCGCGCGGCCGGACTGAAGGTGCTCCAGTTGATCGAGCCCGGCGCTTCGCCGGCGCAAATTGAAGCGGACGCCGACAAAATCCTGGCGTCTTCGTCGGAGCAGAAAACGGCCGCCCGGTTTTGGACCTGGAAAATGCGCATTCCCATTCTGCTGGCATTTCTGGTCGCGTTCTTCAACCAGTTTTCCGGCATCAACGCCATTTTGTATTTTGCGCCGCGCATTTTTGAAATGGCCGGGTTGGCGACGAAATCCGCCTTGCTGCAATCCGTTGGCATCGGGGTGACGAATCTCATTTTCACGTTTGCCGGTTTATGGCTGATTGACCGGCTGGGGCGGCGCACGTTGCTGATGATCGGCGCGCTGGGTTACATCGCCTCGCTGGGTTTGACCGCGTGGGCGTTTTTTAGCCATCACTTTGCCATCGTGCCGGCCTGCATCTTTGCCTTCATCGCGGCCCATGCCATCGGACAGGGAACGGTGATCTGGGTGCTGATTTCGGAGGTGTTTCCGAACCGCCATCGCGCGGAAGGCCAGACGCTCGGCAGCTCCACGCATTGGACCTGCGCCGCGTTGTTGACCACATTTTTTCCGACCATGGTATCCCGGTTTCAACCCGGATATGTGTTTGTCTTTTTTTGCGGCATGATGGTGGTGGAGTTGATCTGGGTGATCACCATGGTGCCGGAGACGAAGGGCGTTCCGCTGGAACAGATGCAGGAAAAACTCGGCATCCGGCGGAACGAGACAGCCGGCGGCACGTCGGGTGGACAAGGATCCGTATGA
PROTEIN sequence
Length: 457
MKKQIFFWSLVSALAGFLFGFDTVVISGAEQKIQALWGLSDAMQGFALASALYGTVLGALLGGVPTDRFGRKKTLLIIGVFYMLSAIGCAFSPGVYSFIAARFIGGLGIGISTVVSPLYISEIAPPAYRGRLAGMFQFNIVFGILVAYGSNWLLSGLGPDDWRWMLGVAAFPSLIYTVCCFVLPESPRWLIGRKGDRAAGLKVLQLIEPGASPAQIEADADKILASSSEQKTAARFWTWKMRIPILLAFLVAFFNQFSGINAILYFAPRIFEMAGLATKSALLQSVGIGVTNLIFTFAGLWLIDRLGRRTLLMIGALGYIASLGLTAWAFFSHHFAIVPACIFAFIAAHAIGQGTVIWVLISEVFPNRHRAEGQTLGSSTHWTCAALLTTFFPTMVSRFQPGYVFVFFCGMMVVELIWVITMVPETKGVPLEQMQEKLGIRRNETAGGTSGGQGSV*