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berkeley_reactor_200306_planktonic_scaffold_228973_72

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(83292..83504)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-1 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL49_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 69.0
  • Bit_score: 122
  • Evalue 1.20e-25
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 69.0
  • Bit_score: 122
  • Evalue 1.70e-25
translation initiation factor IF-1 similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 68.0
  • Bit_score: 99
  • Evalue 2.30e-19

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 213
ATGGAAGAGCATATTGAAATTGAAGGCCGGATTCTGACCGTCCTTGCCGGAACCATGTTCCGGGTGGAACTGGACAACAAACATCAAGTGCTGGCCACCATTTCCGGCAAAATGCGCAAACGGTTCGTCCGTCTCACTTCCGGGGACCGCGTCAAAATGGAAATGTCGCCCTACGACCTGAACAAGGCGCGCATCGTCTGGCGCATCGGCTGA
PROTEIN sequence
Length: 71
MEEHIEIEGRILTVLAGTMFRVELDNKHQVLATISGKMRKRFVRLTSGDRVKMEMSPYDLNKARIVWRIG*