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berkeley_reactor_200306_planktonic_scaffold_228973_75

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(84113..85843)

Top 3 Functional Annotations

Value Algorithm Source
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XN50_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 574.0
  • Bit_score: 797
  • Evalue 5.20e-228
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EEF58712.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 574.0
  • Bit_score: 797
  • Evalue 7.30e-228
single-stranded-DNA-specific exonuclease RecJ similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 577.0
  • Bit_score: 409
  • Evalue 1.50e-111

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1731
ATGAAGTTTCGTTGGTCATTGGTCGCTCCGCAGCCGCTGCTCGCCAACGAACTCGCGGCCCAACTGAAGGTTTCGCCCCTGCTGGCGCAATGCCTCGTCAATCGCGGCTTCAGCGAGGCGCCGTTGATCCGGGATTTTCTCGCGCCCCGGCTCAAAAATCTCGCCGATCCGTTTCTGCTGCCCAACATGAACGCCGCCGTGGAGCGCCTGCTGGCGGCCCGCGAACGCGAGGAATCGCTGGTCATTTTTGGCGACTATGACGTGGACGGTGTGACTTCCACCACGCTGCTGCTGGAAGTCCTGCAAAAGCTCGGCTGGCGTGCGGATGCCTATTTGCCCAGCCGCATGGATGAAGGTTACGGCTTGAGCCGGGACGGCGTGGAAAATTGTCTGAAGAAATATCCCGTCCGGCTTCTGCTCGCGGTGGACTGCGGTTCAACCGCCGTGGAAACCATCGCGTGGCTGCGCGAACGCGGCGTGGAAGTCATCGTGCTCGATCATCATCAGGTCGCATCGCCGCCGCCGGCAGCGGTGGCCCTGGTGAATCCGCAGCTTGCGGTTCCCCATTCGGAATCCCCGGCCGCGTTCACGGAACTTTGTTCCGCCGGCCTGGCGTTCAAACTGGCCCACGCGCTGGTCAAGCGCGGCCGGGAAACCGGCCTGCCCGGCGCGGGTGAATTTGATTTGCGGCCGTTGCTCGACCTGGTCGCGCTGGGCACGATCGCCGATTTGGTGCCGCTTACCGGCGAGAACCGCATTTTGGTCACCGCCGGTCTGGAGCGGTTGAATCGCACCGGGCGTCCGGGATTGGTGGCGTTGAAGGAAGTGGCGCAATCGCCTGAAAAACTTGGCGCCCACGACGTGGGATTTCAACTTGCGCCCCGCCTGAACGCGTCGGGCCGGCTGGAAACCGCGACGGCATCCCTGCATCTGCTGCTCGCGGAATCCCTGGAGGAAGCCCTGCCGCTGGCGCAAAATCTCGACGCCCGCAACCGCGAACGCCAGAACATCGAACGCAGCATCGTCGAGCAGGCGACCGGCATCGTCCGCTCCAAATTCAACGCGGAGACGGATTACGTCATTGTCGAAGGCCGGTTGCTGTGGCACATCGGCGTGGTGGGCATCGTGGCTTCCCGCGTGCTTCAGGAATTTTACCGGCCCACGCTCATCATCGGCGGCGATGGCGACAACTGGCGCGGATCCGGGCGCAGCATCGCGGGCTTTGACCTCGCCGCCGCGTTGCGGGCATGCGACGACTTGCTGCTGCGCCACGGCGGGCATGCCATGGCGGCGGGATTGAGCATTGCGCCGGACAAGATTGATCCCCTGCGCCGGCGTCTGAACGCGCTCGCCAAACAGACGCTCAAACCGGAAGACCTGCGCCCGCCGCTCCGCCTGGATGCCGAGGTGTGTTTGCGCGAACTTACTGTGGAATCGTTGGCGGAGCTCGAAGGGCTGAAACCGACGGGGCAGGGCAATCCGGCGCTGCAGTTTTGTTCCCGGCAACTCATGCTGGCCCGCCCGCTGCAACGCATTGGCTCCAAAAAGCAGCATGTCAAAATGTGGGTGACCGATGGCACCGCCACCCATGAAGCCGTCTGCTGGAATGCGGGTGAAGTCCGCTTTCCAGAGGGCCGGTTTGATCTCGCCTTTGCGCCTTCGGTGAACGCATTCAACGGGCGGACAACCGTGCAGCTCAAGGTGTTGGACTGGAATCAGGCGCGTTCATGA
PROTEIN sequence
Length: 577
MKFRWSLVAPQPLLANELAAQLKVSPLLAQCLVNRGFSEAPLIRDFLAPRLKNLADPFLLPNMNAAVERLLAAREREESLVIFGDYDVDGVTSTTLLLEVLQKLGWRADAYLPSRMDEGYGLSRDGVENCLKKYPVRLLLAVDCGSTAVETIAWLRERGVEVIVLDHHQVASPPPAAVALVNPQLAVPHSESPAAFTELCSAGLAFKLAHALVKRGRETGLPGAGEFDLRPLLDLVALGTIADLVPLTGENRILVTAGLERLNRTGRPGLVALKEVAQSPEKLGAHDVGFQLAPRLNASGRLETATASLHLLLAESLEEALPLAQNLDARNRERQNIERSIVEQATGIVRSKFNAETDYVIVEGRLLWHIGVVGIVASRVLQEFYRPTLIIGGDGDNWRGSGRSIAGFDLAAALRACDDLLLRHGGHAMAAGLSIAPDKIDPLRRRLNALAKQTLKPEDLRPPLRLDAEVCLRELTVESLAELEGLKPTGQGNPALQFCSRQLMLARPLQRIGSKKQHVKMWVTDGTATHEAVCWNAGEVRFPEGRFDLAFAPSVNAFNGRTTVQLKVLDWNQARS*