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berkeley_reactor_200306_planktonic_scaffold_228973_90

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(101766..102140)

Top 3 Functional Annotations

Value Algorithm Source
transposase n=4 Tax=Prochlorothrix hollandica RepID=UPI0003453732 similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 120.0
  • Bit_score: 112
  • Evalue 2.80e-22
Transposase, IS4 family {ECO:0000313|EMBL:KJE21655.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 126.0
  • Bit_score: 115
  • Evalue 2.80e-23
putative transposase similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 123.0
  • Bit_score: 111
  • Evalue 1.10e-22

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Taxonomy

Frankia sp. CpI1-S → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGAAAATCGCCAAATACGACACCGACCTGACTGACGCCCAATGGGCCTACCTCCAACCGATGCTTCCCAAGCTGTCCAAACGCGGTCGTCCGCCCAAGGGTCGGCGACGGATCATTGACGTCATCCTCTATCTGGTCAAATGTGGCTGTCCGTGGCGTTATCTGCCTGTCGGTTTTCCCAAATGGAAAACTGTTTATCACGTCTTCCGCCAGTGGATCGCCAATGATCAATGGGCCGTGATTCACGACCCCCTGCGCGTCCTGGTGCGCCGCAGCCACGACAAACGCAGCCGTCCCACCGCCGCCATCCTGGCCAGTCAAAGCGTCAAATCCGCCGGTCACGGTGGCACGGTGGGTTATGACGTCGCCAAATAA
PROTEIN sequence
Length: 125
MKIAKYDTDLTDAQWAYLQPMLPKLSKRGRPPKGRRRIIDVILYLVKCGCPWRYLPVGFPKWKTVYHVFRQWIANDQWAVIHDPLRVLVRRSHDKRSRPTAAILASQSVKSAGHGGTVGYDVAK*