ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_228973_108

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(135815..137320)

Top 3 Functional Annotations

Value Algorithm Source
4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAA6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 502.0
  • Bit_score: 682
  • Evalue 1.60e-193
4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:EEF63447.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 502.0
  • Bit_score: 682
  • Evalue 2.30e-193
arnT; 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 487.0
  • Bit_score: 278
  • Evalue 3.40e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1506
ATGAAGTCCCTCGAAGCCACGCCCGCGGACGTTTCCGCCCGGCAACTGACAAACCGCATCGGTGTCCGCGACCACGCCGCCACGCTTGCCCTGCTGCTCATCGGCGGCATCACCCTCTTCCGGCTCTGGTATGTCACCCGCCTCGGCCTGGTCGCGGACGAAGCCTATTACTGGCTGTGGTCAAAACATCTGGCGGCGTCCTACACCGACAAGGGGCCGGCCATCGCCTGGATCATTGCCGCGGGCACAAAAGTCTTTGGCGACACCCCGTTTGGCCTTCGCTGGCTGGGCGTCTTGTTGAGCGCGGGCACCGGCTGGCAAATTTTCCGGCTCGCCCGGCGTTTGTTCGACGACCGGGTCGCCCTCTGGTCGCTGGTGGTTTCCACCGTCATCCCGCTCTTCGGCGTGGGCTCGGTGATCATGACCATTGATACGCCCAGTGTCTTTTGCTGGGCCTGGGCCGCGAACGTTTTTTGGACCGCGCTGGAAACCGGCCGGACGCGGCATTGGTTTGGCCTGGGGCTGATCATCGGCGCGGGATTTCTGGCCAAGTTCACGAATGGCGTGCAACTGGCGTGTGTTTTTCTCTTTCTGCTCTGGTCCGCGCCGCATCGCCGGTTTTTCTTCAGCCGCCAAAGCGTGGCGATGGTGCTCGCGTTTGTCCTCTGTTGCGTGCCGGTCATTTGGTGGAATTATTCGGTCGGCTGGCTGCAGGTGGCGGCGTTGCACTCGCGCAGCGGGGTGAAAAATTCCTTCGGCATTCATCCGTCGGAACTGATCAAATTCCTCGGCCTGGAAGTCGGCGTGCTCTCGCCCTTGATCGGCGTTGGCATGGTGGTGGCGGCTTTCGGCTGGTTCATTTCGCGCCGGGGAGATCCCCGCGTTCGTTTTGTGCTCTGCCAGTTCGCGCCGGTGTTCGGCTTGTTTTGCTTTTTCAGCCTCAACGCCGCCGGCAAGGCCAACTGGCCCGCGCCCGGTTTGATCGGCGGCATTATCATGCTGGTGGCGTTCTGGCTGGAGGTGATCCGGCGTCGTCCGGGCTGGCGCTGGGCGGCCGGTTCCGCCTTGATCCTGGCCGGGCTCATGACCGTGGCCCTTCATCTCGCGACGTTCTTTTCGATTCCCGTGGTGAACAAGCTGATGAACCGTTCCGAAGGCTGGCCGGATTACGCCGCGCACATCCAGCGCGCCCGGGAGAAATACCATGTCACGCTGCTGATCGGCGATCACTACTCCACCGTGAGTCTCGCGCAATTTTACCTGCCGGATCATCCCCGGATTTACCAGCCCTCCGGCTGGCATCCGCAATTTATGCTGTGGGGCGATTACCACCTCACGCCGGGCACGCGGGCCCTGTTTATCACCACGGACGGGAATCCCAGCGTCGTCCAAAAACCGCCGTTGCAACAACAGTTTCAGTCGGCGACCCAGGTGGATGACTTCTGGACCGAACAACACGGCCGGAAAATCAAGCAGTTCCACATTTACTATTTGGTCGCCCGCTGA
PROTEIN sequence
Length: 502
MKSLEATPADVSARQLTNRIGVRDHAATLALLLIGGITLFRLWYVTRLGLVADEAYYWLWSKHLAASYTDKGPAIAWIIAAGTKVFGDTPFGLRWLGVLLSAGTGWQIFRLARRLFDDRVALWSLVVSTVIPLFGVGSVIMTIDTPSVFCWAWAANVFWTALETGRTRHWFGLGLIIGAGFLAKFTNGVQLACVFLFLLWSAPHRRFFFSRQSVAMVLAFVLCCVPVIWWNYSVGWLQVAALHSRSGVKNSFGIHPSELIKFLGLEVGVLSPLIGVGMVVAAFGWFISRRGDPRVRFVLCQFAPVFGLFCFFSLNAAGKANWPAPGLIGGIIMLVAFWLEVIRRRPGWRWAAGSALILAGLMTVALHLATFFSIPVVNKLMNRSEGWPDYAAHIQRAREKYHVTLLIGDHYSTVSLAQFYLPDHPRIYQPSGWHPQFMLWGDYHLTPGTRALFITTDGNPSVVQKPPLQQQFQSATQVDDFWTEQHGRKIKQFHIYYLVAR*