name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_planktonic_scaffold_228973_91
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria
|
Not on your lists |
comp(102274..103857)
|
Aldehyde Dehydrogenase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R2H9_PIRSD
aldehyde dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ADB15088.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_92
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
104243..105619
|
Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRX9_OPITP
cytochrome bd ubiquinol oxidase subunit I
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_93
RBG_16_NC10_65_8_curated, NC10, Bacteria
|
Not on your lists |
105628..106650
|
cydB; cytochrome bd-I oxidase subunit II
Cytochrome bd-I oxidase subunit II id=4580863 bin=GWF2_Melioribacter_38_21 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
Tax=RBG_16_NC10_65_8_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_94
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(106876..107520)
|
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEI2_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF61696.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
LuxR family transcriptional regulator
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_95
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(107595..110432)
|
Histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEI3_9BACT
Histidine kinase {ECO:0000313|EMBL:EEF61697.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
two component regulator, sensor protein
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_96
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
110628..112187
|
Sulfotransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XA43_9BACT
Sulfotransferase {ECO:0000313|EMBL:EEF63384.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
sulfotransferase
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_97
unknown
|
Not on your lists |
112458..112598
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_228973_98
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(113084..120142)
|
autotransporter n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745ACF
Membrane protein {ECO:0000313|EMBL:KHS16197.1}; TaxID=87883 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans.;"
autotransporter-associated beta strand repeat family protein
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_99
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(120650..121342)
|
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCZ1_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF62337.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
LuxR family transcriptional regulator
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_100
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(121352..124078)
|
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCZ0_9BACT
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:EEF62336.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_trna_1
unknown
|
Not on your lists |
124337..124409
|
transferRNA Ala
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_101
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
124501..125286
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL85_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EEF59436.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Short-chain alcohol dehydrogenase of unknown specificity
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_102
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(125440..126720)
|
Permease YjgP/YjgQ family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL84_9BACT
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:EEF59435.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
permease
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_103
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(126839..130519)
|
Pectinesterase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXX1_9BACT
Pectinesterase {ECO:0000313|EMBL:EDY21119.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_104
unknown
|
Not on your lists |
comp(130664..131500)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_228973_105
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(131665..132297)
|
Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JPJ0_9BACT
Sigma-70, region 4 family {ECO:0000313|EMBL:EDY84287.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
two component transcriptional regulator, LuxR family
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_106
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(132294..134396)
|
Histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIM8_9BACT
Histidine kinase {ECO:0000313|EMBL:EEF60291.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
histidine kinase
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_107
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(134418..135455)
|
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI000363B103
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC83387.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_108
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(135815..137320)
|
4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAA6_9BACT
4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:EEF63447.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
arnT; 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_109
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(137317..138339)
|
dpm1; dolichol-phosphate mannosyltransferase (EC:2.4.1.83)
Glycosyl transferase family 2 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAA7_9BACT
Glycosyl transferase family 2 {ECO:0000313|EMBL:EEF63448.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_110
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(138475..140637)
|
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZTY2_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB75864.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_111
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(140668..141516)
|
Cytochrome C family protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZTY3_OPITP
cytochrome C family protein
Cytochrome C family protein {ECO:0000313|EMBL:ACB75865.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_112
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria
|
Not on your lists |
comp(141535..143220)
|
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B72528
Tax=RBG_13_Chloroflexi_46_9_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_113
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
143459..144373
|
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_114
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria
|
Not on your lists |
comp(144620..146029)
|
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:ACF14868.1}; EC=4.1.99.3 {ECO:0000313|EMBL:ACF14868.1};; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
Deoxyribodipyrimidine photo-lyase n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QX58_CHLT3
deoxyribodipyrimidine photo-lyase
|
|
berkeley_reactor_200306_planktonic_scaffold_228973_115
unknown
|
Not on your lists |
comp(146085..146555)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_228973_116
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(146645..146920)
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFY2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61144.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|