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berkeley_reactor_200306_planktonic_scaffold_228973_114

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(144620..146029)

Top 3 Functional Annotations

Value Algorithm Source
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:ACF14868.1}; EC=4.1.99.3 {ECO:0000313|EMBL:ACF14868.1};; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 479.0
  • Bit_score: 432
  • Evalue 6.60e-118
Deoxyribodipyrimidine photo-lyase n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QX58_CHLT3 similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 479.0
  • Bit_score: 432
  • Evalue 4.70e-118
deoxyribodipyrimidine photo-lyase similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 479.0
  • Bit_score: 432
  • Evalue 1.30e-118

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Taxonomy

Chloroherpeton thalassium → Chloroherpeton → Chlorobiales → Chlorobia → Chlorobi → Bacteria

Sequences

DNA sequence
Length: 1410
GTGAAACGTGTCATCCATTGGTTCCGCCGTGACTTGCGGGTGTCTGACAATGTCGCCTTGAGCGAGGCGGCGCGCCGGGCGGAATGGGTCATTCCGGTTTTCATTTTCGAGGATGCCTTTCGCACCGGGCCGGATGTCGGCGCGGCGCGACTGGAATTTCTGCTGCAATCCGCCGAATCCCTGCGCAAAAATCTGGCGGAACTTGGCCACACCCTGGTGGTCCGCTGCGGACGGTCCGAGGAAATTCTGCCGCGACTGTGCCGGGAAACCGGGGCGCAGGCGGTTTTCGCCAACAAGCGTTACGAACCCTACGCGCAACGCCGCGATGAACGCATCGCCGGGGTTTTGCTGAAAGCCGGGTTCGGGTTTGAACTGTTCAAAGACGCGGTCATTTGGGAGGAACAGGAAATTCTCACGCAGCAGGAAAAACCTTACACCGTGTTTACGCCGTATTCCAAGGCGTGGAAGGCGCGAACCATTCCGTCACCGGTCCCGAGGTTGAAGGAATCCAGCCTCCCGTCTCCCACTGCTGGCGTCCCGGCGGACGCGCTGCCGTCTTCGGCGGCGGCAGCGGGTTACCCGCTGCGCCAGACGCTTCCCCCGGCCGGCGAGCGCGCGGCGCGGGAGCAGCTTCGCCGGTTCATGGCCGGACCGGTTTATCACTACGGTGGCAACCGGAATTTTCCGGCGCTGGACGGCACCTCGAATCTCTCGCCGCACCTGCGCGCCGGCACGATCGGCATTCGCACCATTCTGGCCGAGCTGGCCAGGGCGCGCGCGAAAGCCGCGCCGCCGCAGACGGCGGGGTGCGATGTTTTTCTGAATGAATTGATCTGGCGCGAATTTTATTTGCAGGTGCTGCACAATTTTCCCCACGTGACCAAAGGCGCCTTCCGCCCGGAATACGACCGGCTAAAGTGGTCGGAGAACCGGGAACATTTTGCCGCGTGGTGCGAGGGCCGGACGGGTTTTCCCATCGTGGACGCGGCGATGCGCTGTCTGAACGCCACGGGCACGATGCACAACCGGTTGCGCATGATCGTGGCGATGTTTCTGACCAAGGATCTGTTGATTCACTGGCAGTGGGGCGAACGTTATTTCATGAAACAACTGGTGGATGGCGACATGGCGGCCAACAACGGCGGCTGGCAGTGGAGCGCGGGCACCGGCACGGATGCGGCGCCGTATTTCCGGATTTTTAATCCGGTGTCGCAGGCGGAAAAATTCGATCCACAGGGGAACTTTGTCCGGCGCTGGCTTCCGGAACTGAAGGATTTTCCGGACGATTTGATCCAGCAGCCGTGGGAAAATCCGCTGCTGCTGGCCAGGTCCAAATATCCGCAGCGGATTGTTTTGCACGAGGAACAACGCGCGAAATGCCTCGCCATGTTCCAAGCGGCGAAAGGTTAA
PROTEIN sequence
Length: 470
VKRVIHWFRRDLRVSDNVALSEAARRAEWVIPVFIFEDAFRTGPDVGAARLEFLLQSAESLRKNLAELGHTLVVRCGRSEEILPRLCRETGAQAVFANKRYEPYAQRRDERIAGVLLKAGFGFELFKDAVIWEEQEILTQQEKPYTVFTPYSKAWKARTIPSPVPRLKESSLPSPTAGVPADALPSSAAAAGYPLRQTLPPAGERAAREQLRRFMAGPVYHYGGNRNFPALDGTSNLSPHLRAGTIGIRTILAELARARAKAAPPQTAGCDVFLNELIWREFYLQVLHNFPHVTKGAFRPEYDRLKWSENREHFAAWCEGRTGFPIVDAAMRCLNATGTMHNRLRMIVAMFLTKDLLIHWQWGERYFMKQLVDGDMAANNGGWQWSAGTGTDAAPYFRIFNPVSQAEKFDPQGNFVRRWLPELKDFPDDLIQQPWENPLLLARSKYPQRIVLHEEQRAKCLAMFQAAKG*