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berkeley_reactor_200306_planktonic_scaffold_228973_106

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(132294..134396)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIM8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 669.0
  • Bit_score: 492
  • Evalue 4.40e-136
Histidine kinase {ECO:0000313|EMBL:EEF60291.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 669.0
  • Bit_score: 492
  • Evalue 6.10e-136
histidine kinase similarity KEGG
DB: KEGG
  • Identity: 28.7
  • Coverage: 696.0
  • Bit_score: 241
  • Evalue 3.80e-61

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2103
ATGCTTGATTCCGGCAAAACGAATGGCGGTTGCGCTTTTTTCAAACGCATTGTTTCAGCCGCTGCGGTCCTGTTTTGGTTGGCGGTGCCGGCCCTCGCCGGGATGCCGGTGGCTCCGGACCGGCCGGCCTTGCTGACCTTGACGACCGCGGGCGAAGTGGCGCAATTAAAGCCCGCCGAGGCGCAACGCGGGTATCCGGTCACGCTGCGCGGCGTGGTCATCAGCGTGGTGCCGGAACATCAGGCGTTCGTGCTGCAGGACGCCACGCGCGGCGTTTTCATCGTGGACACCAACCGGGAAACCGTCCGCGCCGGTGAATTGTGGGCGGTGGACGGGGTGACGGACAAGGGGTCATTCGCGCCGATTGTCAGAAGCCGCCAAAAAACTTTTCTCGGTCCGGGCACCGTGCCGTCGCCGTTGAAAGCCACGTGGGATCAATTGGTGAGCGGCAGCCTGGATGACCAGCTCGTGGCGGTCCAAGGCGTGGTGGAAAGCTCCAGCTATGATCCCGGCGGCTGGTCGCATGTGATTTTGCGAACGCGCGGAGGGGCTTTGCGGGTGGATCTTCCGGGCTCCAATCTCTCCGCCGGCACACTGGGCCGTTGCGACAAAAACCTGGTGCGCATTCAAGGCTGTTACTTTGCGATGACCGACACGAACACCTGGCAGGTCAAGGCGGATGAAATCCGCATTTACGGCGCCCGCATCACGCTGGAGGAGCCGGATGCGACCAACCGGTTTGCCATCCCGGGCCGGGCGATCGCGGCGTTGATGCAGTTTGATCCGCACGCCAGCATGTTTCGCCGCGTGAAAGTGGCCGGCCAGATTCTGCATGTGCGGGGCGATGAATATTTCCTGACGGATGCCACCAACGGCCTGCGTTTCATGGCTTCGCCGGGCCTGGCGTTGCGGCCCGGCGACGAGGTGGAGGTGGTGGGGTTTCCCCGGTTGGGCGGCCCCACGCCGGTGTTGACCGAGGCGGTGGCGCGCAAGACCGGCCATGCGGCACTGCCGCCGGCCCGGCGGTTGTCGCCCGGCGGGCTGATGGACGCGCGGTTGGACTCCATGCGGGTGCGGGTGCAGGGCCGGCTGGCCAGCCTCCAGCACACGCCGTCCCATCTCGTCATGGAAATCCAGACCGGATCCTGGCGGTATCTGGCGCGGTTGAACGCGCCCGCCGCCGCGCAACCGCCGCTGCGCATTGGCAGCACGCTGGCATTGACGGGTGTTTACGCCGAGCAAAGCCACCGGCTGACCCCGGGGGAATCGGTGGTGCCGTTCGAGTTGTTGCTCAATGCGCCGGCCGATATTCGCGTCTTGAAAACGCCGCCGTGGTGGACGTTGCGTCGGTTGCTGGTGGTGGTGGGGGTGCTGGGGGGCGTGCTGGTGCTGGCGGGCTTGTGGATCAACCAGCTGCATCGCCAGGTCGAACGGCGCACGGCGGAACTGGAAACGCAGATTCAAGCGCGCGAGCAAATCGAACATCAACGCGCCATGGAACAGGAACGCGCCCGGATTGCCCGGGATCTGCATGACGAACTGGGGTCGAGCATCACGGAAATCAGCATGCTGGCAACCTGGACGAAATTGACGCCGGCCGGGGAAGCGAAGCGCAGCGAGCTGCTCGAGCAAATGAGCGAGAAGGCGCGGGAAATGGTCGTCGCCCTGGATGAAATCGTCTGGGCGATGAATCCCAAACATGATTCGTTGGTGTCGCTGGTCAGCTATTCCTGCCTGTATGCGGACCGCTTTTTAAAACTGGCAAACATGGAGTGCCAGTTGAAAGGGACCGTGAATCTTCCGGACCGGCCGGTGTCCTCCGCCCAGCGGCACGAAATTTTTCTGGCCTTCAAGGAGGGGTTGAACAATGTGGTGCATCATTCCGGCGCGACCGCAGTCCGGCTCGGCGTGAAGTTGATCGGGAACCGGTTGCGTTTGTCCATCGCGGACAACGGTCGCGGCCTGGCCGCCGGCGTCATGGATCGGAACGGCAACGGTCTGGTCAACATGCGCGAGCGTCTGGAAAAACTGGGCGGCCGGCTGGCCGTGGCGAGCCAGCCGGGCCGCGGAACGATTGTGCGCTTTTACCTGCAACTGTTATGA
PROTEIN sequence
Length: 701
MLDSGKTNGGCAFFKRIVSAAAVLFWLAVPALAGMPVAPDRPALLTLTTAGEVAQLKPAEAQRGYPVTLRGVVISVVPEHQAFVLQDATRGVFIVDTNRETVRAGELWAVDGVTDKGSFAPIVRSRQKTFLGPGTVPSPLKATWDQLVSGSLDDQLVAVQGVVESSSYDPGGWSHVILRTRGGALRVDLPGSNLSAGTLGRCDKNLVRIQGCYFAMTDTNTWQVKADEIRIYGARITLEEPDATNRFAIPGRAIAALMQFDPHASMFRRVKVAGQILHVRGDEYFLTDATNGLRFMASPGLALRPGDEVEVVGFPRLGGPTPVLTEAVARKTGHAALPPARRLSPGGLMDARLDSMRVRVQGRLASLQHTPSHLVMEIQTGSWRYLARLNAPAAAQPPLRIGSTLALTGVYAEQSHRLTPGESVVPFELLLNAPADIRVLKTPPWWTLRRLLVVVGVLGGVLVLAGLWINQLHRQVERRTAELETQIQAREQIEHQRAMEQERARIARDLHDELGSSITEISMLATWTKLTPAGEAKRSELLEQMSEKAREMVVALDEIVWAMNPKHDSLVSLVSYSCLYADRFLKLANMECQLKGTVNLPDRPVSSAQRHEIFLAFKEGLNNVVHHSGATAVRLGVKLIGNRLRLSIADNGRGLAAGVMDRNGNGLVNMRERLEKLGGRLAVASQPGRGTIVRFYLQLL*