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berkeley_reactor_200306_planktonic_scaffold_253396_45

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(56659..59370)

Top 3 Functional Annotations

Value Algorithm Source
Leucine-rich repeat (LRR) protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WFB6_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 799.0
  • Bit_score: 655
  • Evalue 6.60e-185
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 799.0
  • Bit_score: 655
  • Evalue 1.90e-185
Leucine-rich repeat (LRR) protein {ECO:0000313|EMBL:AFZ18469.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 799.0
  • Bit_score: 655
  • Evalue 9.20e-185

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Taxonomy

Microcoleus sp. PCC 7113 → Microcoleus → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 2712
ATGAAAACGACTATTCATCTCTGGGTTCTGGGAACATTCGCGTTATTCACATTTTGCCGGTCCGCCAATGGTGCCGATCAAATCACGCTTCAACTAAACCCCCGCGGCATGCAAAGCGAACTGGGACTGCACTCCCGGTTGGCCTTGCCGGTGAGCGCCCTGTATCCCGAGTATCTGATTCAGCAAAGCACGAACCTGGTGGATTGGACGACGGTGACCGGACCTATTGCCGGGAACGTGGGTGTTTCGGATGAATGGTTGAACATCGCCGTGCCCAGCATGGAAAGCCGCGCCTTCTATCGCGCGGTGGCGAATGTGAAACTGGCGCCGGCCGGAACCAGTTTAGGTGACAGCATCTATGGTTACGGAACCGCCTTCGGTCAGGAGATTAAGCGAGTCGGCCAGCTTTCTCCGGATGGTTTCGTCGCGATGTATGGCCCCACGAATCACTATCTGCCACAAATCACGTTCGATCCCACCGCCGGGGATTTTTGGAATCTGTTCAACATGGATCCCACCGTCTGGAACGCAACAAACTCCTATCAGAATTGGCGACTAACCGATTTCCGGCTCAACCCACAGGAGTTTGCCGTATTTCAAACCAACGGCTTCGTCGTCAGCCAGCGAATGGAGCGCAAGAGTTTTGCCGATGTGTATTACGACCTCTACACGGACGAACTTCCGGTGTTTGTCACGACCGATTCGATTCTGCAGGCGTGGCATCGAACTTTCCTGACGATGCTCGCCGAGATCGAAGAAACGGGCTTCCAGCCTGACCTGCCCAGTTTGCTTGCATCCATGTCAGCGCAGATTCCGAACCTTTGGTCGCAGGCACAGGGAACCGCCATGCAGAATGGCGTGCTGGACGCGGATTACTTTCTCGCGGTGGCGCGGTCGCTCGACAGCGGCGTGACCGATTCCGGTTCACTGGGACAATCGGCGCGAATCACCGCCACGTTGACCGCGATTAACAACCAGCAGCCGGTTAAATTCAACCTGTTCGGTGAGGCGCGCGATGTGGACTTTTCCCAATTCACCGTGCGCGGCCACTACGTCAACTCCGTGGCGCTCTCCCGCTATTTCCGTGCCATGATGTGGTGTAGTCTGGCCGACTACCGTTACGCGGGTTTTGCGAGCGGAAGCGATCTCGGCGACACCAACACCTTGCGCGAACTTTCCGGCGCCGTGGCTTTGGACCTGGCGTTGCGGAATTCCGGCAGCTTCAGCAACTGGATTCAATTCAATCGCACGCTGGAATTGTTTGTCGGCACCCCCGACTCGCTCACCTTTGCCCAATTGGACGGCTTGCTGCAAGCTGCGAAAATCCATTCACCGGCGGATCTTGCCAGCCAGTCGGCCTTGACCAATCTGCAAAACCAGCTCATGACCGGCCAGCTTGGTTTGCAGCAGATTTCCAGCGGTTATTACTATTCGCCGTTCAGCGCAGCACAAGTAAAATTGCCACGGTCTTTTGCCTTCATGGGGCAGCGTTTTGCAATGGACAGTTGGGCGCTTGGCAAATGCACGTTTGACAACATTATTTGGAACGACGACGGCATTCCTGATGTAACGGACAAAGTTTTGAGAAGGGTTCCGAGCGCGCTCGACATTGATTTTGCGGTGTTCGGCAACAGCCAGGTGGTTCCCGAAATCACCGCGCGCATTGTGCGCACCAATCTTACCCCGGCGGATGGCCGGGTTTATTGGCGTGACGGGCTCAAGTATCAGCACAATCTCGCAGCCGTCCGCAAGGTCATTGACCGTCAGAACTCCGCAGCCTGGACCAACAGTATTTTCAATCACTGGCTGGCCTGTTTGCGCGAGCTTTCCCAGCCCACCACGGACTTGAAATATCCTCAAGCGATGCGCACCCGCGCCTGGGCCATGAAGACGGTGAACACCCAGCTCGCGTCCTGGACGCAATTGCGATACACCACCATGCTTTACGCGAAAGAATCTTACACCCCGATTTTGCTATGCTCATATCCGGATGGTTATGTCGAGCCGGTGCCCGCGTTTTGGTCGCGCATGCGCACAATGGCGCTGGCGACCAGGGCGGTTCTGGCCACGCTACCGACCAATGGCATTTACACTTATACGCATTCCACGAATGACGCGTATGGCATGCCGGTTTACTTCGATGTCTCTGTCACTGGCGCCACCATGTATTCGAATCGCCTCGCGGTCCTGGACCGGTTCGCCAACGCGCTCGCCACGCTTGCAGGCATTTCTGAAAAGGAATTGGCCAAGACCGCGCTGGCCACAAATGAAATCGAGTTTTTGAAGGATCTGGTGGAATTTAACTATGCCGGAGAACGCACTTATGGAGGCTGGTATCCCCAATTATTTTATCAGCCGGGAAGCGAGTATGTTCCTCCAAACTTTGACAGCCAGGTTAGCGGTGATAATCAAGGATCCGACTTTTGGGACGCATTGGTCACCACTGTTCATACGGATTCACCCAACCTCCTCGTGGGCGACCCCGGCAGCATTTTAAACGAAGGCATCGGTAATGTTCAGCTTCTGATGATTGCAGTGGACAGCGGCCCAGGCGACCTGGCGGTATATGCCGGCCCAGTGCTGAGTCACTATGAATTCGAAACAGGGCCCACCACGCGTCTCACCGACGACCAGTGGAAGGCGGAGGTCACCAATGACACGCTGCCGCCAGCGCCAGACTGGACGCAAAGTTATCTGGTTCCCAAGCCGTGA
PROTEIN sequence
Length: 904
MKTTIHLWVLGTFALFTFCRSANGADQITLQLNPRGMQSELGLHSRLALPVSALYPEYLIQQSTNLVDWTTVTGPIAGNVGVSDEWLNIAVPSMESRAFYRAVANVKLAPAGTSLGDSIYGYGTAFGQEIKRVGQLSPDGFVAMYGPTNHYLPQITFDPTAGDFWNLFNMDPTVWNATNSYQNWRLTDFRLNPQEFAVFQTNGFVVSQRMERKSFADVYYDLYTDELPVFVTTDSILQAWHRTFLTMLAEIEETGFQPDLPSLLASMSAQIPNLWSQAQGTAMQNGVLDADYFLAVARSLDSGVTDSGSLGQSARITATLTAINNQQPVKFNLFGEARDVDFSQFTVRGHYVNSVALSRYFRAMMWCSLADYRYAGFASGSDLGDTNTLRELSGAVALDLALRNSGSFSNWIQFNRTLELFVGTPDSLTFAQLDGLLQAAKIHSPADLASQSALTNLQNQLMTGQLGLQQISSGYYYSPFSAAQVKLPRSFAFMGQRFAMDSWALGKCTFDNIIWNDDGIPDVTDKVLRRVPSALDIDFAVFGNSQVVPEITARIVRTNLTPADGRVYWRDGLKYQHNLAAVRKVIDRQNSAAWTNSIFNHWLACLRELSQPTTDLKYPQAMRTRAWAMKTVNTQLASWTQLRYTTMLYAKESYTPILLCSYPDGYVEPVPAFWSRMRTMALATRAVLATLPTNGIYTYTHSTNDAYGMPVYFDVSVTGATMYSNRLAVLDRFANALATLAGISEKELAKTALATNEIEFLKDLVEFNYAGERTYGGWYPQLFYQPGSEYVPPNFDSQVSGDNQGSDFWDALVTTVHTDSPNLLVGDPGSILNEGIGNVQLLMIAVDSGPGDLAVYAGPVLSHYEFETGPTTRLTDDQWKAEVTNDTLPPAPDWTQSYLVPKP*