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berkeley_reactor_200306_planktonic_scaffold_253396

Search features with annotation key words

Displaying items 31-60 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_253396_31
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(37467..38813)
DNA (1347bp) protein (449aa)
Putative uncharacterized protein id=4748853 bin=GWC2_Methylomirabilis_70_16 species=Cylindrospermum stagnale genus=Cylindrospermum taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
berkeley_reactor_200306_planktonic_scaffold_253396_32
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(39063..40013)
DNA (951bp) protein (317aa)
ATPase associated with various cellular activities AAA_3 id=4327974 bin=GWA2_Methylomirabilis_73_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MoxR-like ATPase
Tax=GWA2_Rokubacteria_73_35_curated
berkeley_reactor_200306_planktonic_scaffold_253396_33
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(40357..41442)
DNA (1086bp) protein (362aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYI7_OPITP
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ACB77085.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
berkeley_reactor_200306_planktonic_scaffold_253396_34
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(41649..42368)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBC0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62805.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_253396_35
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(42443..42916)
DNA (474bp) protein (158aa)
Fibronectin type III domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD11_9BACT
Fibronectin type III domain protein {ECO:0000313|EMBL:EEF62357.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
fibronectin type III
berkeley_reactor_200306_planktonic_scaffold_253396_36
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(43320..45239)
DNA (1920bp) protein (640aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8A3_9BACT
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EDY17296.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
berkeley_reactor_200306_planktonic_scaffold_253396_37
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(45244..47427)
DNA (2184bp) protein (728aa)
fadB; fatty acid oxidation complex subunit alpha (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8A4_9BACT
3-hydroxyacyl-CoA dehydrogenase NAD-binding {ECO:0000313|EMBL:EDY17297.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
berkeley_reactor_200306_planktonic_scaffold_253396_38
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(47430..48710)
DNA (1281bp) protein (427aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EDY17298.1}; EC=2.3.1.16 {ECO:0000313|EMBL:EDY17298.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Acetyl-CoA acetyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8A5_9BACT
acetyl-CoA acetyltransferase
berkeley_reactor_200306_planktonic_scaffold_253396_39
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(48707..50239)
DNA (1533bp) protein (511aa)
Coenzyme F390 synthetase-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8A6_9BACT
Coenzyme F390 synthetase-like protein {ECO:0000313|EMBL:EDY17299.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_253396_40
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(50196..52133)
DNA (1938bp) protein (646aa)
Patatin n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8A7_9BACT
Patatin {ECO:0000313|EMBL:EDY17300.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative cyclic nucleotide-binding protein
berkeley_reactor_200306_planktonic_scaffold_253396_41
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(52436..53575)
DNA (1140bp) protein (380aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYL0_9BACT
D12 class N6 adenine-specific DNA methyltransferase {ECO:0000313|EMBL:EDY20551.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
berkeley_reactor_200306_planktonic_scaffold_253396_42
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53577..54413)
DNA (837bp) protein (279aa)
SspI n=1 Tax=Sphaerotilus sp. ATCC 13925 RepID=J9T2A8_9BURK
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
berkeley_reactor_200306_planktonic_scaffold_253396_43
unknown

Not on your lists

54649..55224
DNA (576bp) protein (192aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_253396_44
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

55356..56588
DNA (1233bp) protein (411aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01977}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01977};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01977}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01977}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01977}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
pfk; pyrophosphate--fructose-6-phosphate 1-phosphotransferase (EC:2.7.1.90)
Pyrophosphate--fructose-6-phosphate 1-phosphotransferase n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5U7Y9_9PLAN
berkeley_reactor_200306_planktonic_scaffold_253396_45
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(56659..59370)
DNA (2712bp) protein (904aa)
Leucine-rich repeat (LRR) protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WFB6_9CYAN
hypothetical protein
Leucine-rich repeat (LRR) protein {ECO:0000313|EMBL:AFZ18469.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
berkeley_reactor_200306_planktonic_scaffold_253396_46
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(59630..60901)
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003605F9D
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
berkeley_reactor_200306_planktonic_scaffold_253396_47
unknown

Not on your lists

comp(61121..61918)
DNA (798bp) protein (266aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_253396_48
unknown

Not on your lists

62121..62726
DNA (606bp) protein (202aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_253396_49
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(62767..64536)
DNA (1770bp) protein (590aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003722A37
alpha-L-rhamnosidase
Tax=RBG_13_Planctomycetes_62_9_curated
berkeley_reactor_200306_planktonic_scaffold_253396_50
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

64738..65427
DNA (690bp) protein (230aa)
Probable GTP-binding protein EngB n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNY6_9BACT
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ribosome biogenesis GTP-binding protein YsxC
berkeley_reactor_200306_planktonic_scaffold_253396_51
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(65565..66191)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSS0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57122.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
berkeley_reactor_200306_planktonic_scaffold_253396_52
unknown

Not on your lists

66773..67459
DNA (687bp) protein (229aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_253396_53
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

67574..68032
DNA (459bp) protein (153aa)
Response regulator receiver protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6A7_9BACT
Response regulator receiver protein {ECO:0000313|EMBL:EDY18016.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PAS/PAC sensor hybrid histidine kinase
berkeley_reactor_200306_planktonic_scaffold_253396_54
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(68146..68838)
DNA (693bp) protein (231aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDJ3_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF62139.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
LuxR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_253396_55
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(68848..70332)
DNA (1485bp) protein (495aa)
histidine kinase (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAI4_9BACT
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:EEF63019.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
berkeley_reactor_200306_planktonic_scaffold_253396_56
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

70517..71893
DNA (1377bp) protein (459aa)
Aconitate hydratase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBH0_9BACT
Aconitate hydratase domain protein {ECO:0000313|EMBL:EEF62855.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
leuC; 3-isopropylmalate dehydratase large subunit
berkeley_reactor_200306_planktonic_scaffold_253396_57
Smithella sp. SC_K08D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71899..72087
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FWZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KIE16919.1}; TaxID=1487949 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SC_K08D17.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_253396_58
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72152..72373
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034C6088
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
berkeley_reactor_200306_planktonic_scaffold_253396_59
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72509..72907
DNA (399bp) protein (133aa)
hypothetical protein id=14430026 bin=bin3_NC10 species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RBG_16_Gamma2_65_34_curated
berkeley_reactor_200306_planktonic_scaffold_253396_60
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(72911..74215)
DNA (1305bp) protein (435aa)
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKX4_9BACT
Response regulator receiver sensor signal transduction histidine kinase {ECO:0000313|EMBL:EEF59468.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
Displaying items 31-60 of 151 in total

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