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berkeley_reactor_200306_planktonic_scaffold_253396_54

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(68146..68838)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDJ3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 207.0
  • Bit_score: 224
  • Evalue 5.60e-56
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF62139.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 207.0
  • Bit_score: 224
  • Evalue 7.80e-56
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 205.0
  • Bit_score: 193
  • Evalue 3.90e-47

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 693
ATGAACAAAATCGCGGAACCCGAGCACGCTTCGCCCCACGCCATCAAGGTCGTGGTGGTGGAGGATCAAACCTGGATGCGGGAAAATTTGATCCGGGAGATCGCGGGCGATCCCAACCTGAAGTGCGTGCATTCCTATCGCACCGCCGAAGCCGCGCTGCGCGGCATTCCGGAGGACCGGCCCGACGTGGTGCTGATGGACATCAATCTGCCCGGCATGGATGGGGTGGAATGCGTCCGGCGCGTGAAACAACTGCTGCCGGACGTGCGCTGTCTCATGCTGACGGTTTACGAGGAGAGCGAAAAAATTTTCAATTCCTTGCTGGCCGGAGCCAGCGGTTATCTGCTGAAACGCACCAGCACGGAAGAATTGCTGGATGCCATCCGCCAGGTGCATGGCAGCGGATCGCCCATGTCCAGCAGCATCGCGCGGAAAGTCGTGGCTTACTTCAATCAAATGGGGGCGGCCAAGGCGGACAGCGTGGCGGCCTTGTCGCCCCGCGAACAGCAGGTGCTGGAACTGCTGGCCAAGGGGTCCGCCTACAAGGACATCGCGCACCAGCTTTCACTCAGCATTGAAACGGTCCGCATGAATGTGAAACATATTTACGCCAAATTGCACGTCCACTCGCGCGGCGAAGCGACCGCGAAATATCTCCAGACCACGTCGTTCCGCGTGTCCCAAGACGGATGA
PROTEIN sequence
Length: 231
MNKIAEPEHASPHAIKVVVVEDQTWMRENLIREIAGDPNLKCVHSYRTAEAALRGIPEDRPDVVLMDINLPGMDGVECVRRVKQLLPDVRCLMLTVYEESEKIFNSLLAGASGYLLKRTSTEELLDAIRQVHGSGSPMSSSIARKVVAYFNQMGAAKADSVAALSPREQQVLELLAKGSAYKDIAHQLSLSIETVRMNVKHIYAKLHVHSRGEATAKYLQTTSFRVSQDG*