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berkeley_reactor_200306_planktonic_scaffold_253396_55

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(68848..70332)

Top 3 Functional Annotations

Value Algorithm Source
histidine kinase (EC:2.7.13.3) similarity KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 254.0
  • Bit_score: 140
  • Evalue 1.10e-30
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAI4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 453.0
  • Bit_score: 418
  • Evalue 7.40e-114
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:EEF63019.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 453.0
  • Bit_score: 418
  • Evalue 1.00e-113

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1485
ATGGACTTCAACTCCGGCCCCAACTATTTTCATTTTATGCGCCGCCGGCTCCAAATTCATCCGCTGATTTTATCTTGCCGGGCAGGCGTGCCGGTTTTGGTGGCCGTCTGCCTTCACCTTTTGACGTTTTCCGCGCGCGGCACCGTTTTATGGAGTCATCCCGGCACGATACTGGCGTGTGATAATGGCGACGGCACGGACATATTGCACGGGGCGATTCAGCCGCAGGAATCCAATTCTTCCAGCACGCTTTACTTCCGGTTCCGTGTAGATCCCATTTCCGATTCCGCGACGAAATCCATCGCTGATTTTCAGGCGGGGTTCGCGTTCTTTGACCATCATGAGGAGCATCTGGCTGTGGGCAGCACCCGGGTTGCCTGGGCTTACTGCGCCTGGCCCGTTCCCCACACCGAAAAAGGTTTCATAGATTTGAATTCCGCAAAGCCGGAGCAGCCTTTTCATTGGGAATACATCCGCGCCAATGAACCGCGCTATTTCGCCTTAAAAGTCCAGTATGTTCCCGGTCAGCCGGCCCATGTCACCGTATGGCTAAATCCCGATCTCTCCTCGGGCGCAGCGGAAGTCAATCAATCCACCAACTTGGTCACGCAGTTTGACGCCGACGCCACCTTCAATGAAATTCATCTGCTGCATCGCGGCGGAAACGGCGGGGGATGGCGGTTCAGCGAGATGGTGGTGGGCACGTCGTTTGACGACCTGTTGCTGCGGCATTTCTGGCAGCAATGGTGGTTTGTCGCGGTTTGTGTCGCGGTGTTGCTGGCCGCAGTGGCCGGCGGAACGCGGCTCTGGGAGCGGCGGCGGGTCCGGGCGCACATTCAGCGGCTGGAAAACGAGCGGGCGGTGGCGACGGAACGAACCCGCATTGCCCAGGATATTCACGATGAAGTGGGGGTAAACCTGACCAAGATCAGCAAGCTCAGCGACTTGATCGAGCTGAACGAGAAAAGCGGGGAGGCGAATGCCGCGACGCGGCGGACCATTGCCGCCACGGCCCGGGACACCATTCGCGCCATGGACGAAATTGTTTGGGCCATCAATCCCCGCAACGACACGTTGAAGGAGATGGCCGATTATCTGGTTTATTTCACGAATGACTTGCTCGGTTCCACCGGCATCGCCTGCAAGCTGGAGGTGCCGTTGCACTTGCCGGACATTCCGGTCGCGACCGAAGTCAGGCATTCCGTATTCATGGCCGTGAAAGAGGCGCTGAACAATGCGGTCAAGCACGCCGCGCCAGGCGAGATCCAGCTCGGCCTCGAGGTGACGGCGAACCGCATCTCAATTGTCATTGCCGACAACGGCCGGGGATTTAATCTTGATCAGGCCACCGGCGTGGGAAATGGTTTGGAAAACATGCACAAACGATTGGAAACCATCGGCGGCACGCTGGAATGCCATACCCAGCCGGGCGGCGGAACGTCGGTGAAACTGCTCGTCCCGCTTGGGGAAGTTAAAGGAAGTTAG
PROTEIN sequence
Length: 495
MDFNSGPNYFHFMRRRLQIHPLILSCRAGVPVLVAVCLHLLTFSARGTVLWSHPGTILACDNGDGTDILHGAIQPQESNSSSTLYFRFRVDPISDSATKSIADFQAGFAFFDHHEEHLAVGSTRVAWAYCAWPVPHTEKGFIDLNSAKPEQPFHWEYIRANEPRYFALKVQYVPGQPAHVTVWLNPDLSSGAAEVNQSTNLVTQFDADATFNEIHLLHRGGNGGGWRFSEMVVGTSFDDLLLRHFWQQWWFVAVCVAVLLAAVAGGTRLWERRRVRAHIQRLENERAVATERTRIAQDIHDEVGVNLTKISKLSDLIELNEKSGEANAATRRTIAATARDTIRAMDEIVWAINPRNDTLKEMADYLVYFTNDLLGSTGIACKLEVPLHLPDIPVATEVRHSVFMAVKEALNNAVKHAAPGEIQLGLEVTANRISIVIADNGRGFNLDQATGVGNGLENMHKRLETIGGTLECHTQPGGGTSVKLLVPLGEVKGS*