ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_253396_56

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 70517..71893

Top 3 Functional Annotations

Value Algorithm Source
Aconitate hydratase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBH0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 455.0
  • Bit_score: 808
  • Evalue 1.80e-231
Aconitate hydratase domain protein {ECO:0000313|EMBL:EEF62855.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 455.0
  • Bit_score: 808
  • Evalue 2.50e-231
leuC; 3-isopropylmalate dehydratase large subunit similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 456.0
  • Bit_score: 659
  • Evalue 6.50e-187

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1377
ATGACGTTGACAGAAAAACTCCTCGCACGCGCGTCCGGCAAGGCCAGCGTGCAGGCCGGCGACAATATCTGGGTGAACGCGGACGTGCTCATGACGCACGATGTCTGCGGCCCGGGCACCATCGGCGTGTTCAAACGCGAATTCGGCAAGGACGCCAAGGTCTGGGATAAGAACAAAATCGTCATCATTCCCGACCATTACATTTTTACCGCCGATTCCAAGTCCAATCGCAACGTGGACATTCTCCGCGATTTCGTGGCGGAGCAAGATTTGCCGTATTTCTACGACGTCATTGACGACCCGAAAGGCCACTGGCATTTCGACGCCAGCAAGGGTGTTTTGAACCGCCAATACGGTTCGCGCTATGCGGGCGTTTGCCACACGGCGCTGCCGGCCAAAGGTCACACGCGTCCCGGCGAAGTGCTCTTCGGCACGGACTCGCACACCTGCATGGCCGGCGCGTTCAATCAGTTCGCCACGGGCATCGGTAACACGGACGCCGGCTTCGTCATGGGCACGGGCAAACTGCTCATCAAGGTGCCGGAGACGATGCACTTCCGGCTCGAAGGCAAATTGCAGCCCGGCGTCATGGCCAAGGACATTATTCTCCATTGTATCGGTGAAATCGGCTTCGACGGTGCGACGTATCGCGCGATGCAGTTCGACGGTCCCGGCGCCAACAGCCTGAGCATGGACGACCGCATGACGATTGCCAACATGGCCATCGAAGCCGGCGGCAAGAACGGCATTTTTGAATTCGATTCGCGCACGGCGGAATACGTGGATGCGCGCGTGAAATTGAATGGCACGAAAGCCAGCTACCAGCCGGTCGAGCCGGACAAGGACCAGAAGTTCATTTACGAACTTGTCGTGGATTTGAGCCAGCTCGAACCGACGGTCGCCTGCCATCCTGACCCGGGCCAGCGCAAGAAGGCCAAGGAAATGGGCAATATGAAACTGGATCGCGCCTACGTCGGTTCCTGCACCGGTGGCAAAACGAGCGACTTCGTGGAATTCGCCCGCGTTTTGCGCGGCAAGAAGGTCGTCATTGACACCTTTGGCGTGCCGGCCACGCCGGACATCGTCCGCGATTTGCAAACGACCTATTGGGGCGATCAAACCATCTGGCAGGTGCTCGTCAACGCCGGCGTGCAGATGACGGAAAACGCCGGCTGCGCTGCGTGCCTCGGCGGTCCGGTGGACACGTTTGGCCGCATCAACAAATCCGGCATCAAGTGTATCAGCGCCACCAACCGCAATTTCCCCGGTCGCATGGGCGACAAGGAATCGCAGGTGTTCCTCGCAAGTCCGGCCACGGTCGCCGCGAGCGCGTTGACCGGCAAAGTGACGGATCCGCGCGAGTTTGTGGGGAATTGA
PROTEIN sequence
Length: 459
MTLTEKLLARASGKASVQAGDNIWVNADVLMTHDVCGPGTIGVFKREFGKDAKVWDKNKIVIIPDHYIFTADSKSNRNVDILRDFVAEQDLPYFYDVIDDPKGHWHFDASKGVLNRQYGSRYAGVCHTALPAKGHTRPGEVLFGTDSHTCMAGAFNQFATGIGNTDAGFVMGTGKLLIKVPETMHFRLEGKLQPGVMAKDIILHCIGEIGFDGATYRAMQFDGPGANSLSMDDRMTIANMAIEAGGKNGIFEFDSRTAEYVDARVKLNGTKASYQPVEPDKDQKFIYELVVDLSQLEPTVACHPDPGQRKKAKEMGNMKLDRAYVGSCTGGKTSDFVEFARVLRGKKVVIDTFGVPATPDIVRDLQTTYWGDQTIWQVLVNAGVQMTENAGCAACLGGPVDTFGRINKSGIKCISATNRNFPGRMGDKESQVFLASPATVAASALTGKVTDPREFVGN*