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berkeley_reactor_200306_planktonic_scaffold_269654_31

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 50006..50557

Top 3 Functional Annotations

Value Algorithm Source
Putative signal peptide protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKW0_THIDA similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 179.0
  • Bit_score: 188
  • Evalue 3.50e-45
signal peptide protein similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 179.0
  • Bit_score: 188
  • Evalue 1.00e-45
Putative signal peptide protein {ECO:0000313|EMBL:AAZ96662.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 179.0
  • Bit_score: 188
  • Evalue 4.90e-45

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGAGCGACTGGATTCATCGCCTCGTTGCACCGGCGGCCATCATTATCAGCGCCGGCGCCATCCCCTGTTACGCCACCACCTACCTGACCGTGGCGCAGGCGCAGAAACTCTGTTTCACCAACGCGACCCAATTCGTCGCCGCCGACGTGACGCTCACCCGCGCGCAAATGAAGGCCATCGAAAACGATTCCGGCGTGCGGGTGCGGCTGTCGAAGCAGAAAGTCTGGCGCGCCGTGCGGCAGGATCAATTCCTCGGCTGGTTCATCCAGGATGAAGTGCTCGGCAAGCATGAATACATTCAATGGGGGCTGGCGTTGAACCGCGATGGCAGCGTCCGACAGATTGAGATTCTGGATTACCGGGAAACCTACGGCTACCAAATCCGCGACGCGAAATGGCGCGCGCAATTTTACGGCAAATCACATGGCGCCCGGCTGAAGCTGGACGACGACATCAAAAACATCAGCGGAGCCACCTTGAGCAGCCGCCACATCACCGACGGCGTGAAACGGTTGTTGAGCTTCTATGAACTCGTGCTTAAAGGACATTGA
PROTEIN sequence
Length: 184
MSDWIHRLVAPAAIIISAGAIPCYATTYLTVAQAQKLCFTNATQFVAADVTLTRAQMKAIENDSGVRVRLSKQKVWRAVRQDQFLGWFIQDEVLGKHEYIQWGLALNRDGSVRQIEILDYRETYGYQIRDAKWRAQFYGKSHGARLKLDDDIKNISGATLSSRHITDGVKRLLSFYELVLKGH*