name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_planktonic_scaffold_269654_31
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
50006..50557
|
Putative signal peptide protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKW0_THIDA
signal peptide protein
Putative signal peptide protein {ECO:0000313|EMBL:AAZ96662.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_32
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
50532..51380
|
Uncharacterized protein n=1 Tax=Acinetobacter nectaris CIP 110549 RepID=V2TVA0_9GAMM
apbE; thiamine biosynthesis lipoprotein apbE transmembrane
Tax=RBG_16_Gamma2_60_9_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_33
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
51377..51820
|
Putative transmembrane protein n=1 Tax=Ralstonia solanacearum FQY_4 RepID=M4U9S5_RALSL
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AGH83148.1}; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum FQY_4.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_34
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria
|
Not on your lists |
52216..52893
|
High-affinity nickel transporter n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0K0B0_9BACT
High-affinity nickel transporter {ECO:0000313|EMBL:CCG92929.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
High-affinity nickel transporter
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_35
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
53101..54669
|
Malate dehydrogenase {ECO:0000313|EMBL:EDY21482.1}; EC=1.1.1.37 {ECO:0000313|EMBL:EDY21482.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
malate dehydrogenase (EC:1.1.1.37)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037C8208
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_36
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(54676..55995)
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGD6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60987.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_37
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(56003..57496)
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGD5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60986.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_38
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(57550..58149)
|
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
2'-5' RNA ligase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIZ0_9BACT
LigT; 2'-5' RNA ligase
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_39
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
58224..59024
|
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:EEF60118.1}; EC=3.1.3.15 {ECO:0000313|EMBL:EEF60118.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Histidinol phosphate phosphatase HisJ family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ80_9BACT
his2; Histidinol phosphatase, PHP family
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_40
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
59026..60792
|
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XA99_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EEF63440.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
TPR repeat-containing protein
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_41
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
60842..61447
|
Phosphoserine phosphatase/homoserine phosphotransferase n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AUF6_9BACT
Phosphoserine phosphatase/homoserine phosphotransferase {ECO:0000313|EMBL:EIP98647.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
thrH; phosphoserine phosphatase
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_42
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
61550..62452
|
Peptidase M50 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMN1_9BACT
Peptidase M50 {ECO:0000313|EMBL:EEF58930.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_43
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
62670..63791
|
Uncharacterized protein {ECO:0000313|EMBL:EIK91096.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
acyltransferase family protein
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_44
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(63808..64785)
|
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR52_9BACT
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_45
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(64782..65420)
|
Glycerol-3-phosphate acyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR53_9BACT
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
plsY; hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_46
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
65518..66552
|
Oxidoreductase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR54_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:EEF57667.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
oxidoreductase
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_47
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria
|
Not on your lists |
67106..67558
|
Transposase IS200-family protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZZX2_MELRP
transposase IS200-family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_48
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
67665..68864
|
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:EEF57669.1}; EC=2.4.1.182 {ECO:0000313|EMBL:EEF57669.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Lipid-A-disaccharide synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR56_9BACT
lpxB; Lipid A disaccharide synthetase
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_49
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
68907..69158
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJZ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59813.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_50
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
69270..69755
|
Histidine triad (HIT) protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS03_9BACT
Histidine triad (HIT) protein {ECO:0000313|EMBL:EEF57374.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_51
unknown
|
Not on your lists |
69817..70017
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_269654_52
unknown
|
Not on your lists |
70058..70333
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_269654_53
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
70343..71314
|
PhoH family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS04_9BACT
PhoH family protein {ECO:0000313|EMBL:EEF57375.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
phoH; phosphate starvation-inducible protein PhoH, predicted ATPase
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_54
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
71410..71913
|
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Endoribonuclease YbeY n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS05_9BACT
metal-dependent hydrolase
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_55
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(71953..74277)
|
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003822716
Uncharacterized protein {ECO:0000313|EMBL:KHD03937.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
Na-Ca exchanger/integrin-beta4
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_56
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
74450..75115
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS06_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57377.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_57
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
75112..75759
|
DNA repair protein RecO n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS07_9BACT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Recombination protein O RecO
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_58
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
75807..78221
|
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Multi-sensor hybrid histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XN54_9BACT
multi-sensor hybrid histidine kinase
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_59
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
78281..79282
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKW7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59461.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_269654_60
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(79324..80106)
|
Exonuclease, RNase T and DNA polymerase III n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VSD3_POLNA
exonuclease
Exonuclease, RNase T and DNA polymerase III {ECO:0000313|EMBL:ABM38561.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
|