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berkeley_reactor_200306_planktonic_scaffold_269654_40

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 59026..60792

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XA99_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 588.0
  • Bit_score: 474
  • Evalue 1.00e-130
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EEF63440.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 588.0
  • Bit_score: 474
  • Evalue 1.40e-130
TPR repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 588.0
  • Bit_score: 404
  • Evalue 2.80e-110

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1767
ATGGCCACGCCGCGATCCCCCAAATTTTTTCTGCTGGCGGGTCTCGTGCTGGCGCTGGGAACTTTGGCGCTTTATCTGCCTACCCTCGGCTATCCCTTCATCGGTTTCGATGATGACGATTACGTCACCGGCAACGCCATGGTGAAAGCCGGGCTGACCTGGCGGGGCATCCTCTGGGCCTTCAACGGCATCCACGCCGCCAACTGGCATCCGCTGACGTGGATTTTGCTCCTGTTTGAACACGCACTCTTCGGACTCCATGCGGGCGGCTATCATTTCGTGAACGCGCTGCTGCACACCGCCAACACGCTCCTGTTGTTTTGGTTTCTGGTGTTCACCACGGGCGCCCGCTGGCGGAGCGCCTGCGTGGCCGCCTTGTTCGCATGGCATCCCCTGCACGTGGAATCGGTGGCCTGGATTTCCGAATGCAAAGATGTGTTGAGCGCGTTTTTCTGGCTGCTGACGCTGCTCGCGTATGCGCGTTACGCGCGCGGTGTGCCGCACAATCCGCCGCGATTGCCGGATGACGGAGCGGCCGCAAGCTCAAGCCCCTCCCGCGCCGCGTCAGCGTATTACGTGCTGGCCATTGTTTTTGGCGCGTGCGCCATGATGTCCAAGCCCATGACGGTGACCCTGCCGTTTGCGCTGTTGCTGCTGGATGTCTGGCCGCTGAAGCGGCTGGAATTTTCCCAATTCCCCGTGCCCGGCCTGCGCCGGTTGTTGCTGGAAAAAATTCCGTTCTTCCTGCTTTGCGCCGCAGTCTGCGCCGTGACGTATCTGGCCCAGCAAAACCAGGGGGCCGTCAGCCCGATGGAACTCTCCAGCCGGCTGGGCAATGTTCCGGTGGCGTATGCGCGCTATCTCTCCAAACTGTTTTGGCCCGCGAATCTGGCCGTCGTTTATCCCTATGTCTATCACTGGCCCGCGATCACCATCATCGGTTCCGCCATGTTGCTGCTTGTGCTTTCGGCGCTCGCGCTCCGGTGCATCCGGCGCTGGTCATGGCCGGCGGTCGGCTGGTTTTGGTTTTTGGGCACGCTCGTGCCGGCCATCGGCCTGGTGCAAGTCGGCGCCCAGTCCATGGCCGACCGTTACACCTACCTCCCGTCCATCGGTTTGTTCGTTGTCGTGGTCTGGGGCACCGCTGAACTTTGCGCCGCGCGACCGGATCGAAAATGGCTGCTGTCGCTCGCCGGCGGCAGTGCGTTGACCGGTTGCGTGCTGGCCAGCTTCCTGCAAATCGGTTACTGGCGCAGCACCGAAAGTCTTTTCCTGCACACGCTGCAAGTGGCTCCCAACAATTATGTCGCCTTCAATGCCCTGGGCAAGGCGCTCGAAAATGCCGGCCGCGACCAACAAGCCCTGGCCTGTTACCAAAACGCCGTCGCCCTGGAACCGCGCTTCGCCGTCAGCCAGTTCAACCTCGGGATTCTTCTGATTGACCTGGGCAAAAAAACCGAGGCCCTGCCTCATATCGTCGCCGCCGCCAGGCTGGCGCCGGACAATCCCGACGCCCAATTCAACCTGGGCGTGTTCCTGTTCCAACAGCAACAATGGTCCGACGCGGCCCAATGTTTTGAGAACACTCTCAAACTGCGGCCCGGCTTCGCACCCGCGCATTACCGGCTGGGCCAGACCCTCGTTCACCTCGGCCAATTCGCGGCGGCGGCGAACCAGTTTCACACCGCCCTGCGCCTACAGCCGGAGGATGCGGACGCCCGCTCCGCCCTCGACACCTTGCTCGCCGGTCATCCCGAACTGAAATGA
PROTEIN sequence
Length: 589
MATPRSPKFFLLAGLVLALGTLALYLPTLGYPFIGFDDDDYVTGNAMVKAGLTWRGILWAFNGIHAANWHPLTWILLLFEHALFGLHAGGYHFVNALLHTANTLLLFWFLVFTTGARWRSACVAALFAWHPLHVESVAWISECKDVLSAFFWLLTLLAYARYARGVPHNPPRLPDDGAAASSSPSRAASAYYVLAIVFGACAMMSKPMTVTLPFALLLLDVWPLKRLEFSQFPVPGLRRLLLEKIPFFLLCAAVCAVTYLAQQNQGAVSPMELSSRLGNVPVAYARYLSKLFWPANLAVVYPYVYHWPAITIIGSAMLLLVLSALALRCIRRWSWPAVGWFWFLGTLVPAIGLVQVGAQSMADRYTYLPSIGLFVVVVWGTAELCAARPDRKWLLSLAGGSALTGCVLASFLQIGYWRSTESLFLHTLQVAPNNYVAFNALGKALENAGRDQQALACYQNAVALEPRFAVSQFNLGILLIDLGKKTEALPHIVAAARLAPDNPDAQFNLGVFLFQQQQWSDAAQCFENTLKLRPGFAPAHYRLGQTLVHLGQFAAAANQFHTALRLQPEDADARSALDTLLAGHPELK*