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berkeley_reactor_200306_planktonic_scaffold_269654_55

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(71953..74277)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003822716 similarity UNIREF
DB: UNIREF100
  • Identity: 33.8
  • Coverage: 216.0
  • Bit_score: 103
  • Evalue 6.30e-19
Uncharacterized protein {ECO:0000313|EMBL:KHD03937.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.8
  • Coverage: 318.0
  • Bit_score: 109
  • Evalue 2.10e-20
Na-Ca exchanger/integrin-beta4 similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 204.0
  • Bit_score: 98
  • Evalue 5.70e-18

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Taxonomy

Candidatus Thiomargarita nelsonii → Thiomargarita → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2325
ATGGCCGTGACTATTCATCACCTTTTTTCCCGAACTGTTTCCGTCTCAAAACCGGTTTGTTGCCATCACCGCCCGGATCGTAACCACCGGCGGAAAAGTGCGGCGTCGCCGGGAGCGTTTTGGCGTTCGCCCGCGAGCTTCGCCGTGCTGGCCGGCGTTCTCCTGCTGGCGGCCCTGTCGCTCCGCGCGGCGCCGATTTACGTGTTGCAGTATGCCTTCACCAACGCGGTTCCGCAGGGGGCAGGCGTCCCGTCGTTTGGCAGCCGCGCGGTGGCGGGCATCAACGACGATGGCGATGTTTGCGGCACGTTCATGACCAGCAACGCGCTCGACAATACGACGAGTTTTGTCAGCTCCGTTTATTTGCTGCGCTCCAACGGCGTGGCTTACGATTTGTTTCCGCGCGGCATCACGCCCATGGTCACGGGCGCTTTTGCCAATAACCTGACGCAACGCCGTCCCGATGGTTCGGTGCAAATCGTCGGCTCGGTGCAGCAGGCTGATGGTTTTCAGCGCGGCGCCGTTTGGAGTGTGGCGGCGAACGGGAGCATTGCGAGCTTCACTGTGCTGACCAATTATATCTTGCCGACCAACAGCCTCGCGCCAGGCGAACAGGGTTTCGGCGAAGCCAACGCCATTAACGATGCTGGCATGGTGGTGGGCGATGGTAATTCCTATCACGCGGAAAAAGCCTTAACCTGGCAGCCGCCTTACACGCAATCGCCCGGCGGCGAAGGCTGGGGCGATTCGGCGGTGGCCCTGGCGGTGGCCGATGACGGAACCATTTTGGTCAACGGCGATTTCCGAAAGCTCTTCAGCTCGTATTCCTATGGCGGCGCGGCTCTGGTGATGGGCGGCACGCCGACCGAATTGCCGGCGGGAGGAATAGACGCCTACAATTCTGCCACGGTCAACGCCTTCGCCATGGCCGGTTCCACCGTGGTCGGCCAGGCCAGTTTTAGCACCAACGATTATTATTTACCGTTTGTCTGGACGCGGGGGGACGACACGCTGACGCAACTTCCGGCTCCGCCCGGCCTGGGCTATGGCAACACCTGCGAAGCCGATTCCGTGAATACGAATGGCGACGCGGTGGGGTATGTTTACGACACCAACAGTTCCACCAGTTTTTTTACGTTCTGGCAGGCCGGCACGAACGGCCATTTCCGGATTTGGAATCCCTACGCGCTGGATGCTCTTTTGCCGACGCAACCGGACTTTCGCACGTTCGATGGCAGTTATTACCCGTCTTATTACGATATCGCCATCAATGATCACCGGGACATCGCCTTCCACTATTATGGGAATCGTCAGACCGGAGTCTATGATCCCAGCCAGATGTATTATGAAGCCGTGCAGGTGTATCGTCCGGTGGCCACCGGGATCGTGCAATTCACCAATTCAGCCTACGGTTCCTACAATGAGTTTTACGCCACGAAATCCGATGGCGTCATCTCCGCGTCCGTCGAGCTCATCCGCGCCGATGGTTACACGGGACCGGTCACCGTCCATTTCGCCACCAGCGACGGCGATGGGGTTGCCGGCAAGGATTACCTCGCCACCAATGGAGACCTGGCCTGGGGTGTTGGCGAATCCGGCGCCAAGACCATCACCATTCCGCTGGTCACGAACAACTTTGAATACGGGGACCGCACCTTCCAACTGGATTTGAGCGGCGTTTCCGGTGCCGAATTCGGCCTGCGCCAGGCCACCCTGCACATTTACAATTCCGACTACGAGATGCTGGATTTTGTCAACCAGACACCGTCTCAATACGGTGACTATGCCGTGCAAGCCGGCACCACGAATGTCATTGTCACCTTGCGGCGCGACTTTTTCCCGGACGGAACGATGACGATCAGCAACGTGACAACCTACGACGGCAGCGCGGTTGCGGGGGTGGATTATCAGGCGTTCACCAACACCACGCCGGTGACCTGGGCACCCGGCCAGGCCGGCTCGGTCTCCTATTCGATCCCGTTGCTGGACACCACCAATTTCTACTGGCCGGCCAGTTTCAGCATCGAGGCGCAGGGCGCGATTGACGGAACCAATCCCGTGGACACCTGGGCTTACGTGGATATTCTGCCGGTGAGCCAGCGCGGATTTTTCAAATTCGACAACAGCACGCCGCTGCGGCAGGGCAATGCCTTGAACCTGGAGAGCCTCGTGGAACAGGGGGTGACCGTCTCGCTCCAAAGTTCAACCAATCTGGTGGATTGGAAAACCGTGGCACAAGCCGCCTGCACCAACGGCCTGGTTCAATTCAGTCCGGCGCTGCAGCCGGCGGAACCGCGCCAGTTTTATCGCGAAGTGATCAACTGA
PROTEIN sequence
Length: 775
MAVTIHHLFSRTVSVSKPVCCHHRPDRNHRRKSAASPGAFWRSPASFAVLAGVLLLAALSLRAAPIYVLQYAFTNAVPQGAGVPSFGSRAVAGINDDGDVCGTFMTSNALDNTTSFVSSVYLLRSNGVAYDLFPRGITPMVTGAFANNLTQRRPDGSVQIVGSVQQADGFQRGAVWSVAANGSIASFTVLTNYILPTNSLAPGEQGFGEANAINDAGMVVGDGNSYHAEKALTWQPPYTQSPGGEGWGDSAVALAVADDGTILVNGDFRKLFSSYSYGGAALVMGGTPTELPAGGIDAYNSATVNAFAMAGSTVVGQASFSTNDYYLPFVWTRGDDTLTQLPAPPGLGYGNTCEADSVNTNGDAVGYVYDTNSSTSFFTFWQAGTNGHFRIWNPYALDALLPTQPDFRTFDGSYYPSYYDIAINDHRDIAFHYYGNRQTGVYDPSQMYYEAVQVYRPVATGIVQFTNSAYGSYNEFYATKSDGVISASVELIRADGYTGPVTVHFATSDGDGVAGKDYLATNGDLAWGVGESGAKTITIPLVTNNFEYGDRTFQLDLSGVSGAEFGLRQATLHIYNSDYEMLDFVNQTPSQYGDYAVQAGTTNVIVTLRRDFFPDGTMTISNVTTYDGSAVAGVDYQAFTNTTPVTWAPGQAGSVSYSIPLLDTTNFYWPASFSIEAQGAIDGTNPVDTWAYVDILPVSQRGFFKFDNSTPLRQGNALNLESLVEQGVTVSLQSSTNLVDWKTVAQAACTNGLVQFSPALQPAEPRQFYREVIN*