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berkeley_reactor_200306_planktonic_scaffold_255293_41

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(41599..42003)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.7
  • Coverage: 137.0
  • Bit_score: 82
  • Evalue 3.70e-13
PilT domain-containing protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FT33_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 32.8
  • Coverage: 137.0
  • Bit_score: 77
  • Evalue 8.40e-12
PilT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 137.0
  • Bit_score: 72
  • Evalue 7.60e-11

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGAAATACCTGCTGGACACCAATGTCCTTTCGGAATGGTGGAAACCGCAGCCTGCGCCGTCCGTGATCAAATTCATTGAAGCGGAGAATTGGTTTGTTCCCGCCCCGGTCATCGCGGAAATTCAGGAAGGCGCGGAAGTCACCGCCTCCGCTGTCCGAAAAATCCAGATCAACGCCCGGCTGGACGCTTTTATCCGGGATTTTGAAGGCTTGGTGATGGTGTGGGATTCCGCCTGTTCACGCACTTGGGGCAGATTGCGGCACACCGCTGAAGTAAAACGCCAACCGCAGGCACTTTGGGATTCGTTGATCGAGGCAATGGCCGTTCAAAACAATTGCATCATCGCCAGCCGCAACGAAAAAGATTTCCGCCACGCGAAGGTTTTCAATCCCTTCACGGCTTGA
PROTEIN sequence
Length: 135
MKYLLDTNVLSEWWKPQPAPSVIKFIEAENWFVPAPVIAEIQEGAEVTASAVRKIQINARLDAFIRDFEGLVMVWDSACSRTWGRLRHTAEVKRQPQALWDSLIEAMAVQNNCIIASRNEKDFRHAKVFNPFTA*