ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_255293_57

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(59309..60100)

Top 3 Functional Annotations

Value Algorithm Source
Hydrogenase nickel incorporation protein HypB n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VCS9_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 286.0
  • Bit_score: 282
  • Evalue 3.40e-73
Hydrogenase nickel incorporation protein HypB similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 286.0
  • Bit_score: 282
  • Evalue 9.50e-74
Hydrogenase nickel incorporation protein HypB {ECO:0000313|EMBL:AFZ05968.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 286.0
  • Bit_score: 282
  • Evalue 4.70e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oscillatoria nigro-viridis → Oscillatoria → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGTGTCAGGAATGCGGATGCGGCAAACCCGGACCTTACCAGGTCGGCGACCTTCTGGTAAACACCCACCTCCATGCGCACACCTTGGCCGACGGCTCGGTGATGACGCATGCTCATCCGCACCCGCACCGGTTCTTAGAGCTCAACACCAATGTCCTCGGCGGCAATGACCGCGTGGCCGGACAAAATCGCGGCGCGTTCCAGGCTTTGAATCTGCTCGCGCTCAACGTGGTTTCCTCGCCCGGTGCCGGCAAGACCGCGCTGCTGCAAAAGATGTTGCATGAATTGAAAGGCCGGCTCCGTTGCGCCGTCATCGTCGGCGACCTGGCCACCGACAACGACGCCGTCCGGCTGCGCACCACCGGCGCGCCCGTCGTGCCAATCGCCACCGGCACGTTGTGTCACCTGGAAGCCGGCATGGTGGCCGAGGCGATGAAACAACTTGATTTGCGCGCGTTGGATCTGCTCGTCATCGAAAACGTCGGCAATCTGGTTTGTCCCGCGTCGTTCGATCTCGGCGAATCGCTCCGCGTCGTGCTGTTGTCCGTCACGGAAGGCGAGGACAAGCCGCTGAAATATCCGCCCCTGTTCCAGTCCGCCGACGTGGTGCTCGTCACGAAAACCGACCTGGCGGCAGCCGCCGGTTTCGATCGCGGACTCGCGCTGAAAAACATCCGCCAGGCCGCGCCGCGCGCGCGGATTTTTGAGCTGTCTGCCCGCCACGGCGAGGGCGTGCCGGCGTGGTGCGATTATTTGGTGGCGATGCAATCAGCCCGTAAAACCGCCCGCTGA
PROTEIN sequence
Length: 264
MCQECGCGKPGPYQVGDLLVNTHLHAHTLADGSVMTHAHPHPHRFLELNTNVLGGNDRVAGQNRGAFQALNLLALNVVSSPGAGKTALLQKMLHELKGRLRCAVIVGDLATDNDAVRLRTTGAPVVPIATGTLCHLEAGMVAEAMKQLDLRALDLLVIENVGNLVCPASFDLGESLRVVLLSVTEGEDKPLKYPPLFQSADVVLVTKTDLAAAAGFDRGLALKNIRQAAPRARIFELSARHGEGVPAWCDYLVAMQSARKTAR*