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berkeley_reactor_200306_planktonic_scaffold_255293_70

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 76896..78848

Top 3 Functional Annotations

Value Algorithm Source
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEK8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 648.0
  • Bit_score: 1004
  • Evalue 3.20e-290
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 648.0
  • Bit_score: 1004
  • Evalue 4.50e-290
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 634.0
  • Bit_score: 679
  • Evalue 5.10e-193

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1953
ATGTTTGTTTACCCAAAACAATATGATGTCATTGTTGTCGGCGCTGGCCATGCGGGTGTCGAGGCGGCATTGGCCGCTTCCAGAATGGGGTGCGAGACCCTGCTGCTGACGATCAATGCTGATACGATTGGTCAGATGTCATGCAACCCCGCCATCGGCGGCCTGGCGAAAGGTCATTTGGCTCGGGAAATTGATGCCCTTGGCGGTGAAATGGGAAAGGCCACCGATCATTCCGGAATTCAATTTCGAATGCTCAATACTAAAAAAGGGCCAGCCGTTTGGGCACCGCGAGCCCAATGTGATAAAAAAGCCTATCAATTCCGATTAAAATGGATATGTGAATCTGAACCCAATTTAGATGTAAAGCAGGGCCAATCCGCAAAAATACTTCATAAAAACGGCGTCGCGTTTGGCGTTGAAACCACTCTCGAAGTTCAATACTTGAGCAAGACGGTGGTCATCACAACCGGAACATTTTTGCGCGGCCTGATGCACATTGGTTCGAATCAACAATCGGGAGGCCGGGCTGGCGATACGGCCGCAATGGGGCTTTCGGGATCCCTTCGAGAACTCGGGTTGGAGCTTGGCCGGCTAAAAACAGGAACCCCTCCTAGGCTACTTAGAAAATCTATAGATTTTTCTAAAACAGAAACCCAGCCCGGAGACGAGCCAGTGCCTTACTTTACGTTTTGGAAGGATGATTTGTTCCACATGGAACAATCCAGAACCAAACTAGAAAGTCAAACCCGGCCCAATGGCAAGTATCCTCCCAGCTCCATACTAAGTCGCATTGGCAGCCAGTTACCTTGTTACGTCACGTTTACAACGGACAAAACGGCCGAGATTATTCGCAAAAATTTGCATAAATCTCCTCTGTATTCCGGAATGATTGAAGGCGTTGGGCCACGATATTGTCCTTCGATTGAAGATAAAATTGTAAAATTTGCGGATAAAGAGCAGCATCAAATTTTTTTGGAGCCTGAAGGCATCGAAACGGATGAAATTTATGTAAACGGGTTTTCTACCAGTCTGCCGTTTGAGGTGCAGTTTGAAATGGTGCGTTCTATTATTGGATGTGAGAATGCCGAAATTATGCGACCCGCCTACGCTGTGGAGTATGACTTCGCATTTCCCACGCAGTTGCATCCTTCGCTGGAGACCAAGGTCTGCCAAAATCTATTCCTAGCCGGACAAATCAATGGCACTTCCGGGTATGAAGAAGCCGGTGCGCAAGGTCTGATGGCAGGAATTAATGCGGCAAGGCGTGTTCAAAACAAAGATGCCATTGTTCTTCGTCGTGACCAAGCTTACATCGGTGTGTTAATTGATGATTTGGTGACAAAAGGCACGGCGGAGCCATATAGAATGTTCACTTCACGCGCCGAGTATCGTTTATTACTGCGTCAAGACAATGCCGATTTACGCTTGTCGCGAATTGGTTATGAGATAGGACTTCTGCCGACAAGAAATTTTAACAAGTTCGAGGCCAAAGAAAACTCAATCAGCACAGAGATTAAGCGCTTACATTCGACTTATGAAGGGAAAAGCTCGCTGGCGAAAATATTATCCCGGCCGGAAATATCTTATCCAAAACTTCCCGGAGCAAATCCCCAACTGGATTCTGAAGTGGTGCAGCAAGTCGAAATCGCAATCAAATACGCTGGTTATGTAGAACGGCAGGAGGCCGAAGTAGAGCGTTTCAAGAATCTGGAAGACAAGATCATTCCTGATACGTTTGATTATGCCACTGTTCCAAGTTTACGCCTGGAAGCCCGGCAAAAACTGAGCAAAATCCGGCCGCGAACCATTGGCCAAGCTGGCCGGATTTCCGGGGTATCGCCCGCTGACATCAGTATCGTGTTGATTTGGCTGAAGCGGGGAGTGAATTCAAGACCAAGCCAATCTAGTGATCTTGGAAATTGTTGTGCGCTGGATGAGCATAGCCATGAATGA
PROTEIN sequence
Length: 651
MFVYPKQYDVIVVGAGHAGVEAALAASRMGCETLLLTINADTIGQMSCNPAIGGLAKGHLAREIDALGGEMGKATDHSGIQFRMLNTKKGPAVWAPRAQCDKKAYQFRLKWICESEPNLDVKQGQSAKILHKNGVAFGVETTLEVQYLSKTVVITTGTFLRGLMHIGSNQQSGGRAGDTAAMGLSGSLRELGLELGRLKTGTPPRLLRKSIDFSKTETQPGDEPVPYFTFWKDDLFHMEQSRTKLESQTRPNGKYPPSSILSRIGSQLPCYVTFTTDKTAEIIRKNLHKSPLYSGMIEGVGPRYCPSIEDKIVKFADKEQHQIFLEPEGIETDEIYVNGFSTSLPFEVQFEMVRSIIGCENAEIMRPAYAVEYDFAFPTQLHPSLETKVCQNLFLAGQINGTSGYEEAGAQGLMAGINAARRVQNKDAIVLRRDQAYIGVLIDDLVTKGTAEPYRMFTSRAEYRLLLRQDNADLRLSRIGYEIGLLPTRNFNKFEAKENSISTEIKRLHSTYEGKSSLAKILSRPEISYPKLPGANPQLDSEVVQQVEIAIKYAGYVERQEAEVERFKNLEDKIIPDTFDYATVPSLRLEARQKLSKIRPRTIGQAGRISGVSPADISIVLIWLKRGVNSRPSQSSDLGNCCALDEHSHE*