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berkeley_reactor_200306_planktonic_scaffold_255293_86

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 96288..97388

Top 3 Functional Annotations

Value Algorithm Source
recA protein (EC:3.6.3.8) similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 340.0
  • Bit_score: 456
  • Evalue 6.70e-126
Protein RecA n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF42_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 385.0
  • Bit_score: 575
  • Evalue 2.70e-161
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 385.0
  • Bit_score: 575
  • Evalue 3.80e-161

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1101
ATGGCCGCCAAATCCACCGAAAAAAACGCCGAAAAAACTGCTGTCGCCAACGCCAATCCCAATGCCAAAGCCGCCGCCGCCCGCGAACGTGAACTGGACGCCGCCATTTCATCCATCACCAAAGCCTACGGCGACGGCGCCATCATGCGGCTGGGCGACGCGCACGCGCAAAAGAAGATTGAAGTGATCCCCACCGGCGGTTTGGCCATTGACCTGGCGCTGGGTGTGGGCGGAGTTCCGCGCGGCCGTGTGGTGGAGATTTTCGGCCCGGAATCTTCCGGAAAAACCACGCTCATGCTGCACGTTATCGCTAATGCCCAAAAAGCCGGTGGCTTGGCGGCTTTCATTGATGCGGAGCACGCGCTGGATCCGGCTTACGCCAAGAAATTGGGCGTGAATTTGGATGATCTGCTCGTTTCCCAGCCGGATTCCGGTGAAGAAGCGCTCACCATTTGCGAAACGCTCGCCCGCTCGAACGCGTTGGATGTCATCGTGGTGGACTCCGTGGCCGCGCTGGTGCCCAAGGCCGAACTCGAAGGCGAAATGGGCATGGCCACGATGGGCATGCAGGCGCGGTTGATGAGCCAGGCGCTGCGCAAATTGACGGCGGTCTTGAACAAATCCAAAACCACCTGCATTTTCACCAACCAGTTGCGCGAAAAAGTCGGTGTCATGTTTGGCAATCCCGAAACCACGCCCGGCGGCAAGGCGCTGAAATTTTACGCCAGCGTGCGCATTGACATCCGGCGCAAGGACACGCTCAAGGACGCCGCCGGCAACGCGGTCGGCAACCACGCGCGCGTGAAGATCGTGAAAAACAAGGTTGCGCCGCCGTTTGCCGAGGCCGAGTTCGACATCATCTACAACCACGGCATTGACAAGGAAGGCAGCATTCTCGACGTGGGGATTGACGACGGCGTGGTGGAAAAGAAAGGCGCGTGGATTCAATTCGACGGCGCGCTCATCGGCCAGGGCAAGGACGCCGCCAAGAAGGCGCTGGCGGAAAAGCCGGAGCTCGCGAAGAAAATTGTGGATGCCATCATGGCCAAGCGCAACGCCGTGCCGGCGGAAACCCAGGAAGCCGCCAAGGAAGCAAAATAG
PROTEIN sequence
Length: 367
MAAKSTEKNAEKTAVANANPNAKAAAARERELDAAISSITKAYGDGAIMRLGDAHAQKKIEVIPTGGLAIDLALGVGGVPRGRVVEIFGPESSGKTTLMLHVIANAQKAGGLAAFIDAEHALDPAYAKKLGVNLDDLLVSQPDSGEEALTICETLARSNALDVIVVDSVAALVPKAELEGEMGMATMGMQARLMSQALRKLTAVLNKSKTTCIFTNQLREKVGVMFGNPETTPGGKALKFYASVRIDIRRKDTLKDAAGNAVGNHARVKIVKNKVAPPFAEAEFDIIYNHGIDKEGSILDVGIDDGVVEKKGAWIQFDGALIGQGKDAAKKALAEKPELAKKIVDAIMAKRNAVPAETQEAAKEAK*